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热泉土壤中分离出的新种嗜热卡特利氏菌。

Thermocatellispora soli sp. nov., isolated from hot spring soil.

作者信息

Duangupama Thitikorn, Pittayakhajonwut Pattama, Thawai Chitti

机构信息

1​Department of Biology, Faculty of Science, King Mongkut's Institute of Technology Ladkrabang, Bangkok 10520, Thailand.

2​National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Thailand Science Park, Paholyothin Road, Klong Luang, Pathumthani 12120, Thailand.

出版信息

Int J Syst Evol Microbiol. 2019 Jan;69(1):134-138. doi: 10.1099/ijsem.0.003115. Epub 2018 Nov 16.

Abstract

An aerobic, spore-forming, actinomycete, designated strain CHM3-46, was isolated from soil in a hot spring pond located in Chiangmai province, Thailand. The strain exhibited taxonomic characteristics consistent with the genus Thermocatellispora. Strain CHM3-46 produced short, straight chains of warty spores on aerial mycelia. The presence of meso-diaminopimelic acid was observed in the cell-wall peptidoglycan. The whole-cell reducing sugars were glucose, mannose, galacose and ribose. The phospholipids comprised phosphatidylmethylethanolamine, hydroxyphosphatidylmethylethanolamine, phosphatidylethanolamine, hydroxyphosphatidylethanolamine, diphosphatidylglycerol, phosphatidylinositol, four phosphoglycolipids and three unidentified phospholipids. The predominant menaquinones were MK-9(H4), MK-9(H6) and MK-9(H8). 10-methyl C17 : 0, C16 : 0, C17 : 0 and iso-C16 : 0 were identified as the main cellular fatty acids. The G+C content of the genomic DNA was 73.2 mol%. Analysis of the 16S rRNA gene sequence showed that strain CHM3-46 belonged to the genus Thermocatellispora, exhibiting the highest similarity to Thermocatellispora tengchongensis YIM 77521 (98.5 %). Furthermore, a low DNA relatedness value (23.4 %±0.8) and several physiological and biochemical characteristic differences were detected between strain CHM3-46 and its closest relative. Based on the taxonomic data, strain CHM3-46 could be readily distinguished from its closest phylogenetic relative and represents a novel species, for which the name Thermocatellisporasoli sp. nov. is proposed. The type strain is CHM3-46 (=TBRC 7649=NBRC 113148).

摘要

从泰国清迈府一个温泉池的土壤中分离出一株需氧、产芽孢的放线菌,命名为CHM3-46菌株。该菌株表现出与热猫孢菌属一致的分类特征。CHM3-46菌株在气生菌丝体上产生短的、直链的有疣孢子。在细胞壁肽聚糖中观察到内消旋二氨基庚二酸的存在。全细胞还原糖为葡萄糖、甘露糖、半乳糖和核糖。磷脂包括磷脂酰甲基乙醇胺、羟基磷脂酰甲基乙醇胺、磷脂酰乙醇胺、羟基磷脂酰乙醇胺、二磷脂酰甘油、磷脂酰肌醇、四种磷酸糖脂和三种未鉴定的磷脂。主要的甲基萘醌是MK-9(H4)、MK-9(H6)和MK-9(H8)。已鉴定出10-甲基C17 : 0、C16 : 0、C17 : 0和异-C16 : 0为主要的细胞脂肪酸。基因组DNA的G+C含量为73.2mol%。16S rRNA基因序列分析表明,CHM3-46菌株属于热猫孢菌属,与腾冲热猫孢菌YIM 77521的相似性最高(98.5%)。此外,在CHM3-46菌株与其最接近的亲缘菌株之间检测到较低的DNA相关性值(23.4%±0.8)以及一些生理和生化特征差异。基于分类学数据,CHM3-46菌株很容易与其最接近的系统发育亲缘菌株区分开来,代表一个新物种,为此提出了新名称热猫孢菌土壤种(Thermocatellispora soli sp. nov.)。模式菌株为CHM3-46(=TBRC 7649=NBRC 113148)。

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