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通过组装 σ 因子结合 -35 和 -10 框构建合成启动子。

Construction of Synthetic Promoters by Assembling the Sigma Factor Binding -35 and -10 Boxes.

机构信息

The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi, 214122, China.

The Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, Jiangnan University, Wuxi, 214122, China.

出版信息

Biotechnol J. 2019 Jan;14(1):e1800298. doi: 10.1002/biot.201800298. Epub 2018 Dec 7.

Abstract

Promoter is one of the key elements in regulating gene expression. Many natural or synthetic promoters have been modulated by their cis- or tans-regulatory elements to confer instant gene expression change in responding to designated stimuli. In addition, bacterial cells also engage different sigma factors to control the gene expression network at different growth phases or in response to the changing environment and external stresses. In this study, a set of promoters that assimilate the endogenous regulation of different sigma factors σ , σ , σ , and σ are synthesized. Promoters are designed to contain two or more kinds of interlocking sigma factor binding sites. The most competitive sigma factors will be automatically selected by the cell to take over the synthetic promoters during the cell growth course. Some of the synthetic promoters exhibit very strong strengths under different conditions, including stationary phase, low temperature, acidic pH, and high osmotic pressure. Comparing to the T7 promoter, synthetic promoter P achieved higher yields of L-asparaginase and acid urease in Escherichia coli. The research not only expands the synthetic biology toolbox but also provide another strategy to design and construct synthetic promoters in prokaryotes.

摘要

启动子是调节基因表达的关键元件之一。许多天然或合成的启动子通过其顺式或反式调控元件来调节,以响应指定的刺激迅速改变基因表达。此外,细菌细胞还利用不同的σ因子来控制不同生长阶段或响应环境变化和外部应激的基因表达网络。在本研究中,我们合成了一组整合不同σ因子σ、σ、σ和σ内源性调控的启动子。这些启动子被设计成包含两种或多种互锁的σ因子结合位点。在细胞生长过程中,细胞将自动选择最具竞争力的σ因子来接管合成启动子。一些合成启动子在不同条件下表现出很强的活性,包括静止期、低温、酸性 pH 值和高渗透压。与 T7 启动子相比,合成启动子 P 在大肠杆菌中实现了更高的 L-天冬酰胺酶和酸性脲酶产量。该研究不仅扩展了合成生物学工具包,还为原核生物中设计和构建合成启动子提供了另一种策略。

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