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鉴定出两种因子,它们可与许多编码线粒体蛋白的核基因的上游序列以及酵母细胞分裂中重要的遗传元件结合。

Identification of two factors which bind to the upstream sequences of a number of nuclear genes coding for mitochondrial proteins and to genetic elements important for cell division in yeast.

作者信息

Dorsman J C, van Heeswijk W C, Grivell L A

机构信息

Section for Molecular Biology, Department of Molecular Cell Biology, Amsterdam, The Netherlands.

出版信息

Nucleic Acids Res. 1988 Aug 11;16(15):7287-301. doi: 10.1093/nar/16.15.7287.

DOI:10.1093/nar/16.15.7287
PMID:3045755
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC338409/
Abstract

Two abundant factors, GFI and GFII which interact with the 5' flanking regions of nuclear genes coding for proteins of the mitochondrial respiratory chain have been identified. In one case (subunit VIII of QH2: cytochrome c oxidoreductase) the binding sites for both factors overlap completely and their binding is mutually exclusive. For the other 5' regions tested the GFI and GFII binding sites do not coincide. Interestingly, binding sites for GFI and GFII are also present in or at the 3' ends of the coding regions of two genes of the PHO gene family and in DNA elements important for optimal ARS and CEN function respectively. The sites recognized by GFI conform to the consensus RTCRNNNNNNACGNR, while those recognized by GFII contain the element RTCACGTG. We speculate that GFI and GFII may play a role in different cellular processes, dependent on the context of their binding sites and that one of these processes may be the coordination of the expression of genes involved in mitochondrial biogenesis with the progress of the cell cycle.

摘要

已经鉴定出两种丰富的因子,即GFI和GFII,它们与编码线粒体呼吸链蛋白质的核基因的5'侧翼区域相互作用。在一种情况下(QH2:细胞色素c氧化还原酶的亚基VIII),两种因子的结合位点完全重叠,并且它们的结合是相互排斥的。对于测试的其他5'区域,GFI和GFII的结合位点不一致。有趣的是,GFI和GFII的结合位点也分别存在于PHO基因家族的两个基因的编码区域的3'末端或内部,以及对最佳ARS和CEN功能重要的DNA元件中。GFI识别的位点符合共有序列RTCRNNNNNNACGNR,而GFII识别的位点包含元件RTCACGTG。我们推测,GFI和GFII可能在不同的细胞过程中发挥作用,这取决于它们结合位点的背景,并且这些过程之一可能是线粒体生物发生相关基因的表达与细胞周期进程的协调。

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本文引用的文献

1
Identification of silencer binding proteins from yeast: possible roles in SIR control and DNA replication.从酵母中鉴定沉默子结合蛋白:在SIR调控和DNA复制中的可能作用。
EMBO J. 1987 Feb;6(2):461-7. doi: 10.1002/j.1460-2075.1987.tb04776.x.
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Deletion mutations affecting autonomously replicating sequence ARS1 of Saccharomyces cerevisiae.影响酿酒酵母自主复制序列ARS1的缺失突变
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The DNA sequence of the nuclear gene coding for the 17-kd subunit VI of the yeast ubiquinol-cytochrome c reductase: a protein with an extremely high content of acidic amino acids.
酵母着丝粒与启动子因子Cpf1p与细胞色素c1上游区域的相互作用及其对基因表达调控的功能影响。
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4
The multifunctional transcription factors Abf1p, Rap1p and Reb1p are required for full transcriptional activation of the chromosomal PGK gene in Saccharomyces cerevisiae.多功能转录因子Abf1p、Rap1p和Reb1p是酿酒酵母中染色体PGK基因完全转录激活所必需的。
Mol Gen Genet. 1996 Feb 25;250(3):348-56. doi: 10.1007/BF02174393.
5
Saccharomyces cerevisiae BUF protein binds to sequences participating in DNA replication in addition to those mediating transcriptional repression (URS1) and activation.酿酒酵母BUF蛋白除了与介导转录抑制(URS1)和激活的序列结合外,还与参与DNA复制的序列结合。
Mol Cell Biol. 1993 Sep;13(9):5749-61. doi: 10.1128/mcb.13.9.5749-5761.1993.
6
Centromere promoter factors (CPF1) of the yeasts Saccharomyces cerevisiae and Kluyveromyces lactis are functionally exchangeable, despite low overall homology.酿酒酵母和乳酸克鲁维酵母的着丝粒启动子因子(CPF1)尽管总体同源性较低,但在功能上是可互换的。
Curr Genet. 1994 Sep;26(3):198-207. doi: 10.1007/BF00309548.
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Identification of the cis-elements mediating the autogenous control of ribosomal protein L2 mRNA stability in yeast.酵母中介导核糖体蛋白L2 mRNA稳定性自身调控的顺式元件的鉴定。
EMBO J. 1995 Aug 15;14(16):4022-30. doi: 10.1002/j.1460-2075.1995.tb00073.x.
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Curr Genet. 1995 Mar;27(4):312-7. doi: 10.1007/BF00352099.
9
Sequence, expression and mutational analysis of BAF1, a transcriptional activator and ARS1-binding protein of the yeast Saccharomyces cerevisiae.酿酒酵母转录激活因子及ARS1结合蛋白BAF1的序列、表达与突变分析
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Proc Natl Acad Sci U S A. 1983 Jan;80(1):151-5. doi: 10.1073/pnas.80.1.151.
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A gel electrophoresis method for quantifying the binding of proteins to specific DNA regions: application to components of the Escherichia coli lactose operon regulatory system.一种用于定量蛋白质与特定DNA区域结合的凝胶电泳方法:应用于大肠杆菌乳糖操纵子调控系统的组分
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