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转录组谱分析和幼龄团头鲂(Megalobrama amblycephala)肝脏组织对急性热应激的组织学变化。

Transcriptome profiling and histology changes in juvenile blunt snout bream (Megalobrama amblycephala) liver tissue in response to acute thermal stress.

机构信息

Wuxi Fishery College, Nanjing Agricultural University, Wuxi 214081, PR China.

Key Laboratory of Genetic Breeding and Aquaculture Biology of Freshwater Fishes, Ministry of Agriculture, Freshwater Fisheries Research Center, Chinese Academy of Fishery Sciences, Wuxi 214081, PR China.

出版信息

Genomics. 2019 May;111(3):242-250. doi: 10.1016/j.ygeno.2018.11.011. Epub 2018 Nov 17.

Abstract

To understand the precise mechanism and the pathways activated by thermal stress in fish, we sampled livers from juvenile Megalobrama amblycephala exposed to control (25 °C) and test (35 °C) conditions, and performed short read (100 bp) next-generation RNA sequencing (RNA-seq). Using reads from different temperature, expression analysis identified a total of 440 differentially-expressed genes. These genes were related to oxidative stress, apoptosis, immune responses and so on. We used quantitative real-time reverse transcriptase PCR to assess the differential mRNA expression of selected genes that encode antioxidant enzymes and heat shock proteins in response to thermal stress. Fish exposed to thermal stress also showed liver damage associated with serum biochemical parameter changes. The set of genes identified showed regulatory modulation at different temperatures, and therefore could be further studied to determine how thermal stress damages M. amblycephala livers and the possible roles of reactive oxygen species in this process.

摘要

为了了解鱼类受热应激激活的精确机制和途径,我们从暴露于对照(25°C)和试验(35°C)条件下的幼年团头鲂肝脏中采样,并进行了短读(100bp)下一代 RNA 测序(RNA-seq)。利用来自不同温度的读数,表达分析共鉴定出 440 个差异表达基因。这些基因与氧化应激、细胞凋亡、免疫反应等有关。我们使用定量实时逆转录 PCR 评估了编码抗氧化酶和热休克蛋白的选定基因的差异 mRNA 表达,以响应热应激。暴露于热应激的鱼类还表现出与血清生化参数变化相关的肝损伤。鉴定出的这组基因在不同温度下表现出调节调控,因此可以进一步研究,以确定热应激如何损伤团头鲂肝脏以及活性氧在这个过程中的可能作用。

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