• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

The role of an active site histidine in the catalytic mechanism of aspartate transcarbamoylase.

作者信息

Kleanthous C, Wemmer D E, Schachman H K

机构信息

Department of Molecular Biology, University of California, Berkeley 94720.

出版信息

J Biol Chem. 1988 Sep 15;263(26):13062-7.

PMID:3047117
Abstract

Although the allosteric enzyme aspartate transcarbamoylase from Escherichia coli has been the focus of numerous physical and enzymological studies for over 2 decades, the catalytic mechanism is still poorly understood. There has been much speculation regarding the role of a conserved histidine residue at position 134 which recent crystallographic studies have implicated in the catalytic mechanism as a general acid or as a general base. We have used a combination of site-directed mutagenesis, 13C-isotope incorporation, and high field NMR to probe the role of His134 in the catalytic mechanism of aspartate transcarbamoylase. By comparing the wild-type catalytic trimer with that from a partially active mutant in which His134 is replaced by alanine, we have assigned the 13C resonance for His134 in the wild-type enzyme. This residue is shown to have a pK less than 6, indicating that the imidazole ring is unprotonated at pH values optimal for enzymatic activity (pH 8.0). This result eliminates the possibility of His134 participating as a general acid in the carbamoyl transfer mechanism. Since the crystallographic studies indicate that His134 is close enough to hydrogen-bond to the carbonyl of the liganded bisubstrate analog N-(phosphonacetyl)-L-aspartate, the imidazole ring would be oriented as to make it unlikely that the N1 lone pair of electrons could participate in general base catalysis. Moreover, if His134 is implicated in base catalysis, we would have expected a much greater loss of activity upon its replacement by alanine. Perhaps the role of His134 is merely to help position the carbonyl group of carbamoyl phosphate for nucleophilic attack by the alpha-amino group of aspartate.

摘要

相似文献

1
The role of an active site histidine in the catalytic mechanism of aspartate transcarbamoylase.
J Biol Chem. 1988 Sep 15;263(26):13062-7.
2
A 70-amino acid zinc-binding polypeptide fragment from the regulatory chain of aspartate transcarbamoylase causes marked changes in the kinetic mechanism of the catalytic trimer.来自天冬氨酸转氨甲酰酶调节链的一个70个氨基酸的锌结合多肽片段导致催化三聚体的动力学机制发生显著变化。
Protein Sci. 1994 Jun;3(6):967-74. doi: 10.1002/pro.5560030612.
3
The catalytic site of Escherichia coli aspartate transcarbamylase: interaction between histidine 134 and the carbonyl group of the substrate carbamyl phosphate.
Biochemistry. 1990 Sep 11;29(36):8491-8. doi: 10.1021/bi00488a041.
4
Steady-state kinetics and isotope effects on the mutant catalytic trimer of aspartate transcarbamoylase containing the replacement of histidine 134 by alanine.
Biochemistry. 1992 Jul 21;31(28):6585-91. doi: 10.1021/bi00143a031.
5
A single amino acid substitution in the active site of Escherichia coli aspartate transcarbamoylase prevents the allosteric transition.大肠杆菌天冬氨酸转氨甲酰酶活性位点上的单个氨基酸取代会阻止别构转变。
J Mol Biol. 2005 Jun 3;349(2):413-23. doi: 10.1016/j.jmb.2005.03.073. Epub 2005 Apr 9.
6
Importance of a conserved residue, aspartate-162, for the function of Escherichia coli aspartate transcarbamoylase.保守残基天冬氨酸-162对大肠杆菌天冬氨酸转氨甲酰酶功能的重要性。
Biochemistry. 1992 Mar 24;31(11):3026-32. doi: 10.1021/bi00126a026.
7
Function of threonine-55 in the carbamoyl phosphate binding site of Escherichia coli aspartate transcarbamoylase.苏氨酸-55在大肠杆菌天冬氨酸转氨甲酰酶氨甲酰磷酸结合位点中的作用。
Biochemistry. 1989 Dec 26;28(26):9937-43. doi: 10.1021/bi00452a010.
8
Glu-50 in the catalytic chain of Escherichia coli aspartate transcarbamoylase plays a crucial role in the stability of the R quaternary structure.大肠杆菌天冬氨酸转氨甲酰酶催化链中的Glu-50在R四级结构的稳定性中起关键作用。
Protein Sci. 1994 Nov;3(11):1998-2004. doi: 10.1002/pro.5560031112.
9
The contribution of threonine 55 to catalysis in aspartate transcarbamoylase.
Biochemistry. 1992 Jul 21;31(28):6592-7. doi: 10.1021/bi00143a032.
10
Effect of amino acid substitutions on the catalytic and regulatory properties of aspartate transcarbamoylase.氨基酸取代对天冬氨酸转氨甲酰酶催化和调节特性的影响。
Proc Natl Acad Sci U S A. 1986 Aug;83(16):5934-8. doi: 10.1073/pnas.83.16.5934.

引用本文的文献

1
Delving into the Characteristic Features of "Menace" Mycobacterium tuberculosis Homologs: A Structural Dynamics and Proteomics Perspectives.深入探讨“威胁”分枝杆菌同源物的特征:结构动力学和蛋白质组学视角。
Protein J. 2020 Apr;39(2):118-132. doi: 10.1007/s10930-020-09890-4.
2
Solution NMR Spectroscopy for the Study of Enzyme Allostery.用于研究酶变构作用的溶液核磁共振波谱法。
Chem Rev. 2016 Jun 8;116(11):6323-69. doi: 10.1021/acs.chemrev.5b00541. Epub 2016 Jan 6.
3
A solution NMR study showing that active site ligands and nucleotides directly perturb the allosteric equilibrium in aspartate transcarbamoylase.
一项溶液核磁共振研究表明,活性位点配体和核苷酸直接扰乱了天冬氨酸转氨甲酰酶中的别构平衡。
Proc Natl Acad Sci U S A. 2007 May 22;104(21):8815-20. doi: 10.1073/pnas.0703347104. Epub 2007 May 14.
4
Structural similarity between ornithine and aspartate transcarbamoylases of Escherichia coli: characterization of the active site and evidence for an interdomain carboxy-terminal helix in ornithine transcarbamoylase.大肠杆菌鸟氨酸转氨甲酰酶和天冬氨酸转氨甲酰酶之间的结构相似性:鸟氨酸转氨甲酰酶活性位点的表征及结构域间羧基末端螺旋的证据
Protein Sci. 1996 Apr;5(4):709-18. doi: 10.1002/pro.5560050416.
5
Stability of the thrombolytic protein fibrolase: effect of temperature and pH on activity and conformation.
Pharm Res. 1991 Sep;8(9):1103-12. doi: 10.1023/a:1015842032164.
6
1H NMR studies on the catalytic subunit of aspartate transcarbamoylase.天冬氨酸转氨甲酰酶催化亚基的核磁共振氢谱研究。
Proc Natl Acad Sci U S A. 1992 Dec 15;89(24):11881-5. doi: 10.1073/pnas.89.24.11881.