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基于 CRISPR 激活的细胞外受体-配体相互作用的联合筛选。

Pooled extracellular receptor-ligand interaction screening using CRISPR activation.

机构信息

Cell Surface Signalling Laboratory, Wellcome Sanger Institute, Cambridge, CB10 1SA, UK.

Stem Cell Genetics Laboratory, Wellcome Sanger Institute, Cambridge, CB10 1SA, UK.

出版信息

Genome Biol. 2018 Nov 26;19(1):205. doi: 10.1186/s13059-018-1581-3.

Abstract

Extracellular interactions between cell surface receptors are necessary for signaling and adhesion but identifying them remains technically challenging. We describe a cell-based genome-wide approach employing CRISPR activation to identify receptors for a defined ligand. We show receptors for high-affinity antibodies and low-affinity ligands can be unambiguously identified when used in pools or as individual binding probes. We apply this technique to identify ligands for the adhesion G-protein-coupled receptors and show that the Nogo myelin-associated inhibitory proteins are ligands for ADGRB1. This method will enable extracellular receptor-ligand identification on a genome-wide scale.

摘要

细胞表面受体之间的细胞外相互作用对于信号转导和黏附是必需的,但识别它们在技术上仍然具有挑战性。我们描述了一种基于细胞的全基因组方法,该方法利用 CRISPR 激活来鉴定针对特定配体的受体。我们表明,当高亲和力抗体和低亲和力配体用于池或作为单个结合探针时,可以明确鉴定出它们的受体。我们将此技术应用于鉴定黏附 G 蛋白偶联受体的配体,并表明 Nogo 髓鞘相关抑制蛋白是 ADGRB1 的配体。该方法将能够在全基因组范围内识别细胞外受体-配体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a6/6258485/24f5289de80a/13059_2018_1581_Fig1_HTML.jpg

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