From the Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065.
From the Molecular Biology Program, Memorial Sloan Kettering Cancer Center, New York, New York 10065
J Biol Chem. 2019 Jan 18;294(3):852-860. doi: 10.1074/jbc.RA118.005726. Epub 2018 Nov 27.
DNA template damage can potentially block DNA replication. Cells have therefore developed different strategies to repair template lesions. Activation of the bacterial lesion bypass DNA polymerase V (Pol V) requires both the cleavage of the UmuD subunit to UmuD' and the acquisition of a monomer of activated RecA recombinase, forming Pol V Mut. Both of these events are mediated by the generation of RecA* via the formation of a RecA-ssDNA filament during the SOS response. Formation of RecA* is itself modulated by competition with the ssDNA-binding protein (SSB) for binding to ssDNA. Previous observations have demonstrated that RecA filament formation on SSB-coated DNA can be favored in the presence of the recombination mediator proteins RecF, RecO, and RecR. We show here using purified proteins that in the presence of SSB and RecA, a stable RecA-ssDNA filament is not formed, although sufficient RecA* is generated to support some activation of Pol V. The presence of RecFOR increased RecA* generation and allowed Pol V to synthesize longer DNA products and to elongate from an unpaired primer terminus opposite template damage, also without the generation of a stable RecA-ssDNA filament.
DNA 模板损伤可能会阻止 DNA 复制。因此,细胞已经开发出不同的策略来修复模板损伤。细菌损伤旁路 DNA 聚合酶 V(Pol V)的激活需要 UmuD 亚基的切割形成 UmuD'和激活 RecA 重组酶单体的获取,形成 Pol V Mut。这两个事件都通过 SOS 反应期间形成 RecA-ssDNA 丝来介导。RecA的形成本身受到与 ssDNA 结合蛋白 (SSB) 竞争结合 ssDNA 的调节。先前的观察表明,在重组介体蛋白 RecF、RecO 和 RecR 的存在下,RecA 在 SSB 包被的 DNA 上的丝状形成可以得到促进。我们在这里使用纯化的蛋白质表明,尽管生成了足够的 RecA来支持 Pol V 的一些激活,但在 SSB 和 RecA 的存在下,不会形成稳定的 RecA-ssDNA 丝。RecFOR 的存在增加了 RecA*的产生,并允许 Pol V 合成更长的 DNA 产物,并从与模板损伤相对的未配对引物末端延伸,而不会生成稳定的 RecA-ssDNA 丝。