Pereira Elroy Joe, Damare Samir, Furtado Bliss, Ramaiah Nagappa
1Biological Oceanography Division, CSIR-National Institute of Oceanography, Dona Paula, Goa 403004 India.
Present Address: Department of Microbiology, Copernicus University, Toruń, Poland.
3 Biotech. 2018 Dec;8(12):500. doi: 10.1007/s13205-018-1522-6. Epub 2018 Nov 26.
Liquid Chromatography-Mass Spectrometry-Quadrupole Time of Flight (LC/MS QToF) protein profiling of marine-derived NIOMR8 was carried out to evaluate proteins conferring chromate (Cr) resistance and possible metabolic pathways that were altered as a result. Expressional (up or down-regulation) responses to varying Cr (0, 50, 100, 150, and 200 µg mL) concentrations varied, with as many as 346 proteins identified. Most number of proteins-their numbers in parentheses-were up-regulated when grown in medium with 50 µg mL (162) and, down-regulated in medium with 100 (281) or 200 µg mL Cr (280). Among these, eight proteins were commonly up-regulated, while 58 were commonly down-regulated across all conditions of Cr. Expression of protein moieties in metabolic pathways like translation (38), transcription (14), replication (18) and repair (4), metabolism of carbohydrates (26), amino acids (27), nucleotides (17), and membrane transport (21) was evidenced. Up-regulation patterns suggest that reduction of molecular oxygen (5), DNA repair (4) and peptide misfolding (7) were the potential protective mechanisms employed to counter Cr stress. Additionally, proteins associated with biofilm and cell wall biogenesis highlight their hypothetical involvement in toxicity tolerance. Results also indicate that at higher concentrations of Cr, down-regulation of functional proteins impedes normal cellular functions.
采用液相色谱 - 质谱联用 - 四极杆飞行时间质谱(LC/MS QToF)对海洋来源的NIOMR8进行蛋白质谱分析,以评估赋予铬(Cr)抗性的蛋白质以及由此改变的可能代谢途径。对不同Cr(0、50、100、150和200 μg/mL)浓度的表达(上调或下调)反应各不相同,共鉴定出多达346种蛋白质。当在含有50 μg/mL(162种)的培养基中生长时,上调的蛋白质数量最多;而在含有100 μg/mL(281种)或200 μg/mL Cr(280种)的培养基中生长时,下调的蛋白质数量最多。其中,有8种蛋白质在所有Cr条件下均普遍上调,而58种蛋白质在所有Cr条件下均普遍下调。在翻译(38种)、转录(14种)、复制(18种)和修复(4种)、碳水化合物代谢(26种)、氨基酸代谢(27种)、核苷酸代谢(17种)和膜转运(21种)等代谢途径中的蛋白质部分表达得到了证实。上调模式表明,分子氧还原(5种)、DNA修复(4种)和肽错误折叠(7种)是对抗Cr胁迫所采用的潜在保护机制。此外,与生物膜和细胞壁生物合成相关的蛋白质突出了它们在毒性耐受中的假设作用。结果还表明,在较高Cr浓度下,功能蛋白的下调会阻碍正常细胞功能。