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通过在2.5 K和170 K下的单晶中子衍射研究短分子内氢键中的质子无序。

Proton disorder in a short intramolecular hydrogen bond investigated by single-crystal neutron diffraction at 2.5 and 170 K.

作者信息

Truong Khai Nghi, Meven Martin, Englert Ulli

机构信息

Institute of Inorganic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany.

Institute of Crystallography, RWTH Aachen University, and Jülich Centre for Neutron Science (JCNS) at Heinz Maier-Leibnitz Zentrum (FRM-II), Lichtenbergstrasse 1, 85748 Garching, Germany.

出版信息

Acta Crystallogr C Struct Chem. 2018 Dec 1;74(Pt 12):1635-1640. doi: 10.1107/S2053229618015164. Epub 2018 Nov 13.

DOI:10.1107/S2053229618015164
PMID:30516147
Abstract

The substituted acetylacetone 3-[2-(pyridin-4-yl)ethyl]pentane-2,4-dione, CHNO, (1), with an ethylene bridge between the acetylacetone moiety and the heteroaromatic ring, represents an attractive linker for mixed-metal coordination polymers. In the crystal, (1) adopts an antiperiplanar conformation with respect to the C-C bond in the central ethylene group and almost coplanar acetylacetone and pyridyl groups. The ditopic molecule exists as the enol tautomer, with proton disorder in the short intramolecular hydrogen bond. Single-crystal neutron diffraction at 2.5 K indicated site occupancies of 0.602 (17) and 0.398 (17). The geometry of the acetylacetone moiety is in agreement with such a site preference of the bridging hydrogen: the O atom associated with the preferred H-atom site subtends the longer [1.305 (2) Å] and the more carbonyl-like O atom the shorter [1.288 (2) Å] C-O bond. Based on structure-factor calculations for the alternative H-atom sites, reflections particularly sensitive for proton distribution were identified and measured in a second neutron data collection at 170 K. At this temperature, 546 independent neutron intensities were used to refine positional and isotropic displacement parameters for a structure model in which parameters for C and O atoms were constrained to those obtained by single-crystal X-ray diffraction at the same temperature. The site occupancies for the disordered proton do not significantly differ from those at 2.5 K.

摘要

取代乙酰丙酮3-[2-(吡啶-4-基)乙基]戊烷-2,4-二酮(CHNO,(1))在乙酰丙酮部分和杂芳环之间有一个乙烯桥,是混合金属配位聚合物中一种有吸引力的连接体。在晶体中,(1)相对于中心乙烯基团中的C-C键采取反式平面构象,乙酰丙酮基团和吡啶基团几乎共平面。该双位点分子以烯醇互变异构体形式存在,在短分子内氢键中存在质子无序。在2.5 K下的单晶中子衍射表明位点占有率为0.602 (17)和0.398 (17)。乙酰丙酮部分的几何结构与桥连氢的这种位点偏好一致:与优先氢原子位点相关的O原子对应的C-O键较长[1.305 (2) Å],而羰基样O原子对应的C-O键较短[1.288 (2) Å]。基于对替代氢原子位点的结构因子计算,确定了对质子分布特别敏感的反射,并在170 K下的第二次中子数据收集中进行了测量。在此温度下,546个独立的中子强度用于精修结构模型的位置和各向同性位移参数,其中C和O原子的参数被约束为在相同温度下通过单晶X射线衍射获得的参数。无序质子的位点占有率与2.5 K时的占有率没有显著差异。

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