Faculty of Advanced Life Science, Hokkaido University, Sapporo 060-0810, Japan.
Faculty of Advanced Life Science, Hokkaido University, Sapporo 060-0810, Japan; Global Station for Soft Matter, Global Institution for Collaborative Research and Education, Hokkaido University, Sapporo 060-0810, Japan.
Biochim Biophys Acta Bioenerg. 2019 Feb 1;1860(2):136-146. doi: 10.1016/j.bbabio.2018.12.001. Epub 2018 Dec 7.
Mastigocladopsis repens halorhodopsin (MrHR) is a Cl-pumping rhodopsin that belongs to a distinct cluster far from other Cl pumps. We investigated its pumping function by analyzing its photocycle and the effect of amino acid replacements. MrHR can bind I similar to Cl but cannot transport it. I-bound MrHR undergoes a photocycle but lacks the intermediates after L, suggesting that, in the Cl-pumping photocycle, Cl moves to the cytoplasmic (CP) channel during L decay. A photocycle similar to that of the I-bound form was also observed for a mutant of the Asp200 residue, which is superconserved and assumed to be deprotonated in most microbial rhodopsins. This residue is probably close to the Cl-binding site and the protonated Schiff base, in which a chromophore retinal binds to a specific Lys residue. However, the D200N mutation affected neither the Cl-binding affinity nor the absorption spectrum, but completely eliminated the Cl-pumping function. Thus, the Asp200 residue probably protonates in the dark state but deprotonates during the photocycle. Indeed, a H release was detected for photolyzed MrHR by using an indium‑tin oxide electrode, which acts as a good time-resolved pH sensor. This H release disappeared in the I-bound form of the wild-type and Cl-bound form of the D200N mutant. Thus, Asp200 residue probably deprotonates during L decay and then drives the Cl movement to the CP channel.
匍匐枝动弯孢藻盐视紫红质(MrHR)是一种 Cl 泵浦视紫红质,属于一个与其他 Cl 泵明显分离的簇。我们通过分析其光循环和氨基酸替换的影响来研究其泵浦功能。MrHR 可以像 Cl 一样结合 I,但不能运输它。I 结合的 MrHR 经历一个光循环,但缺乏 L 衰减后的中间产物,这表明在 Cl 泵浦光循环中,Cl 在 L 衰减期间移动到细胞质(CP)通道。Asp200 残基突变体也观察到类似于 I 结合形式的光循环,该残基高度保守,在大多数微生物视紫红质中被假定为去质子化。该残基可能靠近 Cl 结合位点和质子化的 Schiff 碱,其中视黄醛发色团与特定的 Lys 残基结合。然而,D200N 突变既不影响 Cl 结合亲和力,也不影响吸收光谱,但完全消除了 Cl 泵浦功能。因此,Asp200 残基可能在黑暗状态下质子化,但在光循环过程中去质子化。事实上,通过使用氧化铟锡电极检测到光解 MrHR 的 H 释放,氧化铟锡电极可以作为一种良好的时间分辨 pH 传感器。在野生型的 I 结合形式和 D200N 突变体的 Cl 结合形式中,这种 H 释放消失了。因此,Asp200 残基可能在 L 衰减期间去质子化,然后驱动 Cl 向 CP 通道移动。