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建立一种常规 RT-PCR 检测方法,用于快速检测猪德尔塔冠状病毒,其检测限与 SYBR Green 实时 RT-PCR 检测方法相同。

Development of a Conventional RT-PCR Assay for Rapid Detection of Porcine Deltacoronavirus with the Same Detection Limit as a SYBR Green-Based Real-Time RT-PCR Assay.

机构信息

Guangdong Key Laboratory of Laboratory Animals, Guangdong Laboratory Animals, Monitoring Institute, Guangzhou, China.

College of Animal Science, South China Agricultural University, Guangzhou, China.

出版信息

Biomed Res Int. 2018 Nov 6;2018:5035139. doi: 10.1155/2018/5035139. eCollection 2018.

DOI:10.1155/2018/5035139
PMID:30533434
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6247729/
Abstract

Porcine deltacoronavirus (PDCoV) is a newly discovered coronavirus, which belongs to the family Coronaviridae. It causes watery diarrhea, vomiting, and dehydration in newborn piglets. A sensitive RT-PCR method is urgently required to detect PDCoV infection. In this study, we developed and evaluated a conventional RT-PCR assay and a SYBR green-based real-time RT-PCR assay that targeted the PDCoV gene. Both assays are specific and have the same limit of detection at 2 × 10 copies of RNA molecules per reaction. Eighty-four clinical samples were subjected to both conventional RT-PCR and real-time RT-PCR, and the same positive rate (41.7%) was achieved, which was much higher than the positive rate (26.2%) using a previously described one-step RT-PCR technique. In summary, a conventional RT-PCR technique was successfully established for the detection of PDCoV with the same detection limit as a SYBR green-based real-time RT-PCR assay.

摘要

猪德尔塔冠状病毒(PDCoV)是一种新发现的冠状病毒,属于冠状病毒科。它会导致新生仔猪出现水样腹泻、呕吐和脱水。目前急需一种灵敏的 RT-PCR 方法来检测 PDCoV 感染。在这项研究中,我们开发并评估了一种针对 PDCoV 基因的常规 RT-PCR 检测方法和一种 SYBR Green 实时 RT-PCR 检测方法。这两种方法均具有特异性,检测限均为每个反应 2×10 个 RNA 分子拷贝。对 84 份临床样本进行了常规 RT-PCR 和实时 RT-PCR 检测,阳性率相同(41.7%),明显高于先前描述的一步法 RT-PCR 技术(26.2%)。总之,成功建立了一种常规 RT-PCR 技术,用于检测 PDCoV,其检测限与 SYBR Green 实时 RT-PCR 检测方法相同。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce0d/6247729/916a3abcd52a/BMRI2018-5035139.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce0d/6247729/4af97da058f0/BMRI2018-5035139.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce0d/6247729/916a3abcd52a/BMRI2018-5035139.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce0d/6247729/4af97da058f0/BMRI2018-5035139.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce0d/6247729/916a3abcd52a/BMRI2018-5035139.002.jpg

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