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本文引用的文献

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Canu: scalable and accurate long-read assembly via adaptive -mer weighting and repeat separation.Canu：通过自适应k-mer加权和重复序列分离实现可扩展且准确的长读长序列拼接
Genome Res. 2017 May;27(5):722-736. doi: 10.1101/gr.215087.116. Epub 2017 Mar 15.
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Detection, isolation, and identification of Vibrio cholerae from the environment.从环境中检测、分离和鉴定霍乱弧菌。
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Rapid method for species-specific identification of Vibrio cholerae using primers targeted to the gene of outer membrane protein OmpW.使用靶向外膜蛋白OmpW基因的引物对霍乱弧菌进行种特异性鉴定的快速方法。
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DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae.霍乱病原体霍乱弧菌两条染色体的DNA序列。
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Genetic diversity of Vibrio cholerae in Chesapeake Bay determined by amplified fragment length polymorphism fingerprinting.利用扩增片段长度多态性指纹图谱法测定切萨皮克湾霍乱弧菌的遗传多样性。
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Epidemiology, genetics, and ecology of toxigenic Vibrio cholerae.产毒性霍乱弧菌的流行病学、遗传学与生态学
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Characterization of Vibrio cgolerae non-O1 serogroups obtained from an outbreak of diarrhea in Lima, Peru.从秘鲁利马一次腹泻暴发中分离出的非O1群霍乱弧菌的特性分析。
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8
Toxin, toxin-coregulated pili, and the toxR regulon are essential for Vibrio cholerae pathogenesis in humans.毒素、毒素协同调节菌毛和toxR调控子对于霍乱弧菌在人类中的致病机制至关重要。
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从俄亥俄州托莱多市莫米河中分离出的霍乱弧菌D1菌株的基因组序列。

Genome Sequence of Vibrio cholerae Strain D1, Isolated from the Maumee River in Toledo, Ohio.

作者信息

Matson Jyl S

机构信息

Department of Medical Microbiology and Immunology, University of Toledo, Toledo, Ohio, USA.

出版信息

Microbiol Resour Announc. 2018 Oct 25;7(16). doi: 10.1128/MRA.01312-18. eCollection 2018 Oct.

DOI:10.1128/MRA.01312-18
PMID:30533736
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6256572/
Abstract

Vibrio cholerae is a human bacterial pathogen and an inhabitant of aquatic environments. It is endemic to many regions of the world but is typically found in warm climates in saltwater. Here, we present the sequence of a V. cholerae strain isolated from a freshwater river in Ohio.

摘要

霍乱弧菌是一种人类细菌病原体，也是水生环境中的一种微生物。它在世界许多地区都有地方流行，但通常在温暖气候的咸水中被发现。在此，我们展示了从俄亥俄州一条淡水河中分离出的一株霍乱弧菌的序列。