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重复性脆性位点:着丝粒卫星DNA作为人类疾病中基因组不稳定的一个来源

Repetitive Fragile Sites: Centromere Satellite DNA As a Source of Genome Instability in Human Diseases.

作者信息

Black Elizabeth M, Giunta Simona

机构信息

Laboratory of Chromosome and Cell Biology, The Rockefeller University, 1230 York Avenue, New York, NY 10065, USA.

出版信息

Genes (Basel). 2018 Dec 7;9(12):615. doi: 10.3390/genes9120615.

DOI:10.3390/genes9120615
PMID:30544645
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6315641/
Abstract

Maintenance of an intact genome is essential for cellular and organismal homeostasis. The centromere is a specialized chromosomal locus required for faithful genome inheritance at each round of cell division. Human centromeres are composed of large tandem arrays of repetitive alpha-satellite DNA, which are often sites of aberrant rearrangements that may lead to chromosome fusions and genetic abnormalities. While the centromere has an essential role in chromosome segregation during mitosis, the long and repetitive nature of the highly identical repeats has greatly hindered in-depth genetic studies, and complete annotation of all human centromeres is still lacking. Here, we review our current understanding of human centromere genetics and epigenetics as well as recent investigations into the role of centromere DNA in disease, with a special focus on cancer, aging, and human immunodeficiency⁻centromeric instability⁻facial anomalies (ICF) syndrome. We also highlight the causes and consequences of genomic instability at these large repetitive arrays and describe the possible sources of centromere fragility. The novel connection between alpha-satellite DNA instability and human pathological conditions emphasizes the importance of obtaining a truly complete human genome assembly and accelerating our understanding of centromere repeats' role in physiology and beyond.

摘要

维持完整的基因组对于细胞和机体的稳态至关重要。着丝粒是每一轮细胞分裂时基因组忠实遗传所必需的特殊染色体位点。人类着丝粒由大量串联排列的重复α-卫星DNA组成,这些区域常常是异常重排的位点,可能导致染色体融合和基因异常。虽然着丝粒在有丝分裂过程中的染色体分离中起着至关重要的作用,但高度同源重复序列的长链和重复性极大地阻碍了深入的遗传学研究,目前仍缺乏对所有人类着丝粒的完整注释。在此,我们综述了目前对人类着丝粒遗传学和表观遗传学的理解,以及近期对着丝粒DNA在疾病中的作用的研究,特别关注癌症、衰老和人类免疫缺陷-着丝粒不稳定-面部异常(ICF)综合征。我们还强调了这些大型重复序列处基因组不稳定的原因和后果,并描述了着丝粒脆弱性的可能来源。α-卫星DNA不稳定性与人类病理状况之间的新联系强调了获得真正完整的人类基因组组装以及加速我们对着丝粒重复序列在生理学及其他方面作用的理解的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/75cc/6315641/c031fa825c79/genes-09-00615-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/75cc/6315641/e407ec9fef0c/genes-09-00615-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/75cc/6315641/c031fa825c79/genes-09-00615-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/75cc/6315641/e407ec9fef0c/genes-09-00615-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/75cc/6315641/c031fa825c79/genes-09-00615-g002.jpg

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2
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Nat Cell Biol. 2019 Jun;21(6):743-754. doi: 10.1038/s41556-019-0331-4. Epub 2019 Jun 3.
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HJURP antagonizes CENP-A mislocalization driven by the H3.3 chaperones HIRA and DAXX.
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PLoS Biol. 2024 Nov 21;22(11):e3002911. doi: 10.1371/journal.pbio.3002911. eCollection 2024 Nov.
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Comparative analysis of predicted DNA secondary structures infers complex human centromere topology.对预测的DNA二级结构进行比较分析可推断出复杂的人类着丝粒拓扑结构。
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