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[大肠杆菌和植物叶绿体核糖体蛋白S4和S7中识别DNA的螺旋-转角-螺旋结构的RNA识别功能]

[RNA-recognizing function of the DNA-recognizing structure helix-turn-helix in ribosomal proteins S4 and S7 of Escherichia coli and plant chloroplasts].

作者信息

Shestopalov B V

出版信息

Mol Biol (Mosk). 1988 May-Jun;22(3):624-7.

PMID:3054493
Abstract

The segments which satisfy the necessary requirements for DNA-recognizing structure helix-turn-helix coding have been found in amino acid sequences of RNA-recognizing E. coli ribosomal proteins S4 and S7. It has appeared that among these segments there are those that in chloroplasts S4 and S7 homologues satisfy these necessary requirements also: S4-97-121 and 108-132 (Ec), 91-115 and 102-126 (Zea mays); S7-109-133 (Ec) 110-134 (Euglena gracilis, Glycine max). Such segments have been confronted with known experimental data on 16S rRNA-binding region localization. It has appeared: 1) the segment 97-121 of S4 is localized in RNA-recognizing fragment 46-124 and one of two RNA-binding regions of this fragment containing Lys-120--belongs to the predicted DNA-recognizing structure; the segment 109-133 of S7 includes the only RNA-binding region of S7-113-117. It is concluded that E. coli ribosomal proteins S4 and S7 and their homologues from plant chloroplasts have a DNA-recognizing structure helix-turn-helix performing the RNA-recognizing function.

摘要

在识别RNA的大肠杆菌核糖体蛋白S4和S7的氨基酸序列中,已发现满足DNA识别结构螺旋-转角-螺旋编码必要条件的片段。结果表明,在这些片段中,叶绿体S4和S7同源物中的某些片段也满足这些必要条件:S4-97-121和108-132(大肠杆菌)、91-115和102-126(玉米);S7-109-133(大肠杆菌)、110-134(纤细裸藻、大豆)。已将这些片段与关于16S rRNA结合区域定位的已知实验数据进行对比。结果表明:1)S4的97-121片段位于RNA识别片段46-124中,该片段的两个RNA结合区域之一包含赖氨酸-120,属于预测的DNA识别结构;S7的109-133片段包括S7-113-117的唯一RNA结合区域。得出的结论是,大肠杆菌核糖体蛋白S4和S7及其来自植物叶绿体的同源物具有执行RNA识别功能的DNA识别结构螺旋-转角-螺旋。

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