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A类丝氨酸-β-内酰胺酶KPC-2的H、C和N主链共振归属

H, C, and N backbone resonance assignments for KPC-2, a class A serine-β-lactamase.

作者信息

VanPelt Jamie, Shurina Ben A, Ramelot Theresa A, Bonomo Robert A, Page Richard C

机构信息

Department of Chemistry and Biochemistry, Miami University, 651 E. High St, Oxford, OH, 45056, USA.

Medical Service and Geriatric Research Education and Clinical Centers, Louis Stokes Cleveland Department of Veterans Affairs Medical Center, Cleveland, OH, USA.

出版信息

Biomol NMR Assign. 2019 Apr;13(1):139-142. doi: 10.1007/s12104-018-9866-8. Epub 2018 Dec 14.

Abstract

The ever-increasing occurrence of antibiotic resistance presents a major threat to public health. Specifically, resistance conferred by β-lactamases places the efficacy of currently available antibiotics at risk. Klebsiella pneumoniae carbapenemase-2 (KPC-2) is a β-lactamase that enables carbapenem resistance and represents a clear and present danger to global public health. In order to combat bacterial infections harboring KPC-2 expression, inhibitors with improved potency need to be developed. Although the structure of KPC-2 has been solved by X-ray crystallography, NMR provides the unique opportunity to study the structure and dynamics of flexible loop regions in solution. Here we report the H, C, and N backbone chemical shift assignments for KPC-2 in the apo state as the first step towards the study of KPC-2 dynamics in the presence and absence of ligands to enable the rational design of optimized inhibitors.

摘要

抗生素耐药性的不断增加对公众健康构成了重大威胁。具体而言,β-内酰胺酶赋予的耐药性使现有抗生素的疗效面临风险。肺炎克雷伯菌碳青霉烯酶-2(KPC-2)是一种能导致对碳青霉烯类耐药的β-内酰胺酶,对全球公众健康构成了切实的明显威胁。为了对抗携带KPC-2表达的细菌感染,需要开发效力更强的抑制剂。尽管KPC-2的结构已通过X射线晶体学解析,但核磁共振(NMR)提供了独特的机会来研究溶液中柔性环区域的结构和动力学。在此,我们报告了无配体状态下KPC-2的氢、碳和氮主链化学位移归属,这是研究存在和不存在配体时KPC-2动力学以实现优化抑制剂合理设计的第一步。

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