Bioinformatics Interdepartmental Program, UCLA, Los Angeles, CA, USA.
Department of Integrative Biology and Physiology, UCLA, Los Angeles, CA, USA.
Nat Neurosci. 2019 Jan;22(1):25-36. doi: 10.1038/s41593-018-0287-x. Epub 2018 Dec 17.
Transcriptomic analyses of postmortem brains have begun to elucidate molecular abnormalities in autism spectrum disorder (ASD). However, a crucial pathway involved in synaptic development, RNA editing, has not yet been studied on a genome-wide scale. Here we profiled global patterns of adenosine-to-inosine (A-to-I) editing in a large cohort of postmortem brains of people with ASD. We observed a global bias for hypoediting in ASD brains, which was shared across brain regions and involved many synaptic genes. We show that the Fragile X proteins FMRP and FXR1P interact with RNA-editing enzymes (ADAR proteins) and modulate A-to-I editing. Furthermore, we observed convergent patterns of RNA-editing alterations in ASD and Fragile X syndrome, establishing this as a molecular link between these related diseases. Our findings, which are corroborated across multiple data sets, including dup15q (genomic duplication of 15q11.2-13.1) cases associated with intellectual disability, highlight RNA-editing dysregulation in ASD and reveal new mechanisms underlying this disorder.
对尸检大脑的转录组分析已经开始阐明自闭症谱系障碍 (ASD) 中的分子异常。然而,在全基因组范围内,涉及突触发育的关键途径 RNA 编辑尚未得到研究。在这里,我们对 ASD 患者大量尸检大脑中的腺苷到肌苷 (A-to-I) 编辑进行了分析。我们观察到 ASD 大脑中的整体低编辑偏向,这种偏向在大脑区域之间共享,并涉及许多突触基因。我们表明,脆性 X 蛋白 FMRP 和 FXR1P 与 RNA 编辑酶(ADAR 蛋白)相互作用并调节 A-to-I 编辑。此外,我们观察到 ASD 和脆性 X 综合征中 RNA 编辑改变的趋同模式,这确立了这两种相关疾病之间的分子联系。我们的发现得到了多个数据集的支持,包括与智力障碍相关的dup15q(15q11.2-13.1 基因组重复)病例,突出了 ASD 中的 RNA 编辑失调,并揭示了这种疾病的新机制。