Virus-Cell Interaction Section, HIV Dynamics and Replication Program, Center for Cancer Research, National Cancer Institute, Frederick, Maryland, USA.
Faculty of Life Sciences and Biotechnology, South Asian University, New Delhi, India.
J Virol. 2019 Mar 5;93(6). doi: 10.1128/JVI.02017-18. Print 2019 Mar 15.
A betulinic acid-based compound, bevirimat (BVM), inhibits HIV-1 maturation by blocking a late step in protease-mediated Gag processing: the cleavage of the capsid-spacer peptide 1 (CA-SP1) intermediate to mature CA. Previous studies showed that mutations conferring resistance to BVM cluster around the CA-SP1 cleavage site. Single amino acid polymorphisms in the SP1 region of Gag and the C terminus of CA reduced HIV-1 susceptibility to BVM, leading to the discontinuation of BVM's clinical development. We recently reported a series of "second-generation" BVM analogs that display markedly improved potency and breadth of activity relative to the parent molecule. Here, we demonstrate that viral clones bearing BVM resistance mutations near the C terminus of CA are potently inhibited by second-generation BVM analogs. We performed selection experiments to identify mutations that confer resistance to these novel compounds. Selection experiments with subtype B HIV-1 identified an Ala-to-Val mutation at SP1 residue 1 and a Pro-to-Ala mutation at CA residue 157 within the major homology region (MHR). In selection experiments with subtype C HIV-1, we identified mutations at CA residue 230 (CA-V230M) and SP1 residue 1 (SP1-A1V), residue 5 (SP1-S5N), and residue 10 (SP1-G10R). The positions at which resistance mutations arose are highly conserved across multiple subtypes of HIV-1. We demonstrate that the mutations confer modest to high-level maturation inhibitor resistance. In most cases, resistance was not associated with a detectable increase in the kinetics of CA-SP1 processing. These results identify mutations that confer resistance to second-generation maturation inhibitors and provide novel insights into the mechanism of resistance. HIV-1 maturation inhibitors are a class of small-molecule compounds that block a late step in the viral protease-mediated processing of the Gag polyprotein precursor, the viral protein responsible for the formation of virus particles. The first-in-class HIV-1 maturation inhibitor bevirimat was highly effective in blocking HIV-1 replication, but its activity was compromised by naturally occurring sequence polymorphisms within Gag. Recently developed bevirimat analogs, referred to as "second-generation" maturation inhibitors, overcome this issue. To understand more about how these second-generation compounds block HIV-1 maturation, here we selected for HIV-1 mutants that are resistant to these compounds. Selections were performed in the context of two different subtypes of HIV-1. We identified a small set of mutations at highly conserved positions within the capsid and spacer peptide 1 domains of Gag that confer resistance. Identification and analysis of these maturation inhibitor-resistant mutants provide insights into the mechanisms of resistance to these compounds.
基于桦木酸的化合物比福马韦(BVM)通过阻断蛋白酶介导的 Gag 加工的晚期步骤来抑制 HIV-1 成熟:切割衣壳-间隔肽 1(CA-SP1)中间体以成熟 CA。先前的研究表明,对 BVM 产生抗药性的突变聚集在 CA-SP1 切割位点周围。Gag 的 SP1 区域和 CA 末端的单个氨基酸多态性降低了 HIV-1 对 BVM 的敏感性,导致 BVM 的临床开发停止。我们最近报道了一系列“第二代”BVM 类似物,与母体分子相比,它们具有明显提高的效力和活性广谱性。在这里,我们证明了带有 CA 末端附近 BVM 抗性突变的病毒克隆被第二代 BVM 类似物强烈抑制。我们进行了选择实验,以鉴定赋予这些新型化合物抗性的突变。用亚型 B HIV-1 进行选择实验鉴定了主要同源区(MHR)内 SP1 残基 1 处的丙氨酸到缬氨酸突变和 CA 残基 157 处的脯氨酸到丙氨酸突变。在用亚型 C HIV-1 进行的选择实验中,我们鉴定了 CA 残基 230(CA-V230M)和 SP1 残基 1(SP1-A1V)、残基 5(SP1-S5N)和残基 10(SP1-G10R)的突变。在多种 HIV-1 亚型中,出现抗性突变的位置高度保守。我们证明这些突变赋予中等至高水平的成熟抑制剂抗性。在大多数情况下,抗性与 CA-SP1 加工动力学的可检测增加无关。这些结果确定了赋予对第二代成熟抑制剂抗性的突变,并为抗性机制提供了新的见解。HIV-1 成熟抑制剂是一类小分子化合物,可阻断病毒蛋白酶介导的 Gag 多蛋白前体加工的晚期步骤,该病毒蛋白负责形成病毒颗粒。第一类 HIV-1 成熟抑制剂比福马韦(bevirimat)在阻断 HIV-1 复制方面非常有效,但由于 Gag 内的天然序列多态性,其活性受到影响。最近开发的比福马韦类似物,称为“第二代”成熟抑制剂,克服了这个问题。为了更深入地了解这些第二代化合物如何阻断 HIV-1 成熟,我们在这里选择了对这些化合物具有抗性的 HIV-1 突变体。在两种不同亚型的 HIV-1 背景下进行了选择。我们在 Gag 的衣壳和间隔肽 1 结构域内高度保守的位置鉴定了一小部分突变,这些突变赋予了抗性。鉴定和分析这些成熟抑制剂抗性突变体为这些化合物的抗性机制提供了新的见解。