Department of Medicinal Chemistry, Faculty of Pharmacy, Isfahan University of Medical Sciences, 81746-73461 Isfahan, Iran.
Bioinformatics Research Center, School of Pharmacy and Pharmaceutical Sciences, Isfahan University of Medical Sciences, Isfahan, Iran.
Med Chem. 2019;15(7):755-770. doi: 10.2174/1573406415666181219113225.
Despite the progress in the discovery of antiretroviral compounds for treating HIV-1 infection by targeting HIV integrase (IN), a promising and well-known drug target against HIV-1, there is a growing need to increase the armamentarium against HIV, for avoiding the drug resistance issue.
To develop novel HIV-1 IN inhibitors, a series of 3-hydroxy-pyrane-4-one (HP) and 3- hydroxy-pyridine-4-one (HPO) derivatives have been rationally designed and synthesized.
To provide a significant characterization of the novel compounds, in-depth computational analysis was performed using a novel HIV-1 IN/DNA binary 3D-model for investigating the binding mode of the newly conceived molecules in complex with IN. The 3D-model was generated using the proto-type foamy virus (PFV) DNA as a structural template, positioning the viral polydesoxyribonucleic chain into the HIV-1 IN homology model. Moreover, a series of in vitro tests were performed including HIV-1 activity inhibition, HIV-1 IN activity inhibition, HIV-1 IN strand transfer activity inhibition and cellular toxicity.
Bioassay results indicated that most of HP analogues including HPa, HPb, HPc, HPd, HPe and HPg, showed favorable inhibitory activities against HIV-1-IN in the low micromolar range. Particularly halogenated derivatives (HPb and HPd) offered the best biological activities in terms of reduced toxicity and optimum inhibitory activities against HIV-1 IN and HIV-1 in cell culture.
Halogenated derivatives, HPb and HPd, displayed the most promising anti-HIV profile, paving the way to the optimization of the presented scaffolds for developing new effective antiviral agents.
尽管在针对 HIV-1 的有前途且知名的药物靶点 HIV 整合酶 (IN) 方面,发现了治疗 HIV-1 感染的抗逆转录病毒化合物方面取得了进展,但仍需要增加抗 HIV 的武器库,以避免耐药问题。
为了开发新型 HIV-1 IN 抑制剂,我们合理设计并合成了一系列 3-羟基-吡喃-4-酮 (HP) 和 3-羟基-吡啶-4-酮 (HPO) 衍生物。
为了对新型化合物进行深入的特性分析,我们使用新型 HIV-1 IN/DNA 二元 3D 模型进行了深入的计算分析,以研究新构思的分子与 IN 复合物的结合模式。该 3D 模型是使用原型泡沫病毒 (PFV) DNA 作为结构模板生成的,将病毒多脱氧核糖核酸链定位到 HIV-1 IN 同源模型中。此外,还进行了一系列体外测试,包括 HIV-1 活性抑制、HIV-1 IN 活性抑制、HIV-1 IN 链转移活性抑制和细胞毒性。
生物测定结果表明,大多数 HP 类似物,包括 HPa、HPb、HPc、HPd、HPe 和 HPg,在低微摩尔范围内对 HIV-1-IN 表现出良好的抑制活性。特别是卤代衍生物 (HPb 和 HPd) 在降低毒性和优化对 HIV-1 IN 和 HIV-1 的抑制活性方面表现出最佳的生物活性。
卤代衍生物 HPb 和 HPd 显示出最有前途的抗 HIV 特性,为优化现有支架以开发新的有效抗病毒药物铺平了道路。