Structural Biology Group, European Synchrotron Radiation Facility, CS 40220, F-38043, Grenoble, France.
Max Planck Institute for Evolutionary Anthropology, D-04103, Leipzig, Germany.
Sci Rep. 2018 Dec 20;8(1):18008. doi: 10.1038/s41598-018-36195-5.
The availability of genomic data from extinct homini such as Neanderthals has caused a revolution in palaeontology allowing the identification of modern human-specific protein substitutions. Currently, little is known as to how these substitutions alter the proteins on a molecular level. Here, we investigate adenylosuccinate lyase, a conserved enzyme involved in purine metabolism for which several substitutions in the modern human protein (hADSL) have been described to affect intelligence and behaviour. During evolution, modern humans acquired a specific substitution (Ala429Val) in ADSL distinguishing it from the ancestral variant present in Neanderthals (nADSL). We show here that despite this conservative substitution being solvent exposed and located distant from the active site, there is a difference in thermal stability, but not enzymology or ligand binding between nADSL and hADSL. Substitutions near residue 429 which do not profoundly affect enzymology were previously reported to cause neurological symptoms in humans. This study also reveals that ADSL undergoes conformational changes during catalysis which, together with the crystal structure of a hitherto undetermined product bound conformation, explains the molecular origin of disease for several modern human ADSL mutants.
灭绝的原始人类(如尼安德特人)的基因组数据的出现引发了古生物学的革命,使得现代人类特有的蛋白质替换的鉴定成为可能。目前,人们对这些替换如何在分子水平上改变蛋白质知之甚少。在这里,我们研究了腺嘌呤琥珀酸裂解酶,这是一种参与嘌呤代谢的保守酶,现代人类蛋白质(hADSL)中的几个替换已被描述为影响智力和行为。在进化过程中,现代人类在 ADSL 中获得了一个特定的替换(Ala429Val),使其与尼安德特人(nADSL)中存在的祖先变体区分开来。我们在这里表明,尽管这个保守的替换位于溶剂暴露的位置,且距离活性位点较远,但 nADSL 和 hADSL 之间在热稳定性上存在差异,但在酶学或配体结合方面没有差异。以前曾报道过,位于残基 429 附近的替换不会严重影响酶学,却会导致人类出现神经系统症状。这项研究还揭示了 ADSL 在催化过程中会发生构象变化,这一变化与一个迄今尚未确定的结合产物构象的晶体结构一起,解释了几种现代人类 ADSL 突变体疾病的分子起源。