De Maria Antolinos Alejandro, Pernot Petra, Brennich Martha E, Kieffer Jérôme, Bowler Matthew W, Delageniere Solange, Ohlsson Staffan, Malbet Monaco Stephanie, Ashton Alun, Franke Daniel, Svergun Dmitri, McSweeney Sean, Gordon Elspeth, Round Adam
European Synchrotron Radiation Facility, 71 avenue des Martyrs, CS 40220, 38042 Grenoble, France.
European Molecular Biology Laboratory, Grenoble Outstation, 71 avenue des Martyrs, CS 90181, 38042 Grenoble, France.
Acta Crystallogr D Biol Crystallogr. 2015 Jan 1;71(Pt 1):76-85. doi: 10.1107/S1399004714019609.
Logging experiments with the laboratory-information management system ISPyB (Information System for Protein crystallography Beamlines) enhances the automation of small-angle X-ray scattering of biological macromolecules in solution (BioSAXS) experiments. The ISPyB interface provides immediate user-oriented online feedback and enables data cross-checking and downstream analysis. To optimize data quality and completeness, ISPyBB (ISPyB for BioSAXS) makes it simple for users to compare the results from new measurements with previous acquisitions from the same day or earlier experiments in order to maximize the ability to collect all data required in a single synchrotron visit. The graphical user interface (GUI) of ISPyBB has been designed to guide users in the preparation of an experiment. The input of sample information and the ability to outline the experimental aims in advance provides feedback on the number of measurements required, calculation of expected sample volumes and time needed to collect the data: all of this information aids the users to better prepare for their trip to the synchrotron. A prototype version of the ISPyBB database is now available at the European Synchrotron Radiation Facility (ESRF) beamline BM29 and is already greatly appreciated by academic users and industrial clients. It will soon be available at the PETRA III beamline P12 and the Diamond Light Source beamlines I22 and B21.
使用实验室信息管理系统ISPyB(蛋白质晶体学光束线信息系统)进行日志记录实验,可提高溶液中生物大分子小角X射线散射(BioSAXS)实验的自动化程度。ISPyB界面提供即时的面向用户的在线反馈,并支持数据交叉检查和下游分析。为了优化数据质量和完整性,ISPyBB(用于BioSAXS的ISPyB)让用户能够轻松地将新测量结果与同一天或更早实验的先前采集数据进行比较,以便在单次同步加速器访问中最大限度地收集所需的所有数据。ISPyBB的图形用户界面(GUI)旨在指导用户准备实验。输入样品信息以及提前概述实验目的,可提供所需测量次数的反馈、预期样品体积的计算以及收集数据所需的时间:所有这些信息有助于用户更好地为前往同步加速器做准备。ISPyBB数据库的原型版本现已在欧洲同步辐射装置(ESRF)光束线BM29上可用,并已受到学术用户和工业客户的高度赞赏。它很快将在PETRA III光束线P12以及钻石光源光束线I22和B21上提供。