Lee T T, Worby C, Bao Z Q, Dixon J E, Colman R F
Department of Chemistry and Biochemistry, University of Delaware, Newark 19716, USA.
Biochemistry. 1999 Jan 5;38(1):22-32. doi: 10.1021/bi982299s.
Mutant adenylosuccinate lyases of Bacillus subtilis were prepared by site-directed mutagenesis with replacements for His141, previously identified by affinity labeling as being in the active site [Lee, T. T., Worby, C., Dixon, J. E., and Colman, R. F. (1997) J. Biol. Chem. 272, 458-465]. Four substitutions (A, L, E, Q) yield mutant enzyme with no detectable catalytic activity, while the H141R mutant is about 10(-)5 as active as the wild-type enzyme. Kinetic studies show, for the H141R enzyme, a Km that is only 3 times that of the wild-type enzyme. Minimal activity was also observed for mutant enzymes with replacements for His68 [Lee, T. T., Worby, C., Bao, Z. -Q., Dixon, J. E., and Colman, R. F. (1998) Biochemistry 37, 8481-8489]. Measurement of the reversible binding of radioactive adenylosuccinate by inactive mutant enzymes with substitutions at either position 68 or 141 shows that their affinities for substrate are decreased by only 10-40-fold. These results suggest that His141, like His68, plays an important role in catalysis, but not in substrate binding. Evidence is consistent with the hypothesis that His141 and His68 function, respectively, as the catalytic base and acid. Circular dichroism spectroscopy and gel filtration chromatography conducted on wild-type and all His141 and His68 mutants reveal that none of the mutant enzymes exhibits major structural changes and that all the enzymes are tetramers. Mixing inactive His141 with inactive His68 mutant enzymes leads to striking increases in catalytic activity. This complementation of mutant enzymes indicates that His141 and His68 come from different subunits to form the active site. A tetrameric structure of adenylosuccinate lyase was constructed by homology modeling based on the known structures in the fumarase superfamily, including argininosuccinate lyase, delta-crystallin, fumarase, and aspartase. The model suggests that each active site is constituted by residues from three subunits, and that His141 and His68 come from two different subunits.
通过定点诱变制备了枯草芽孢杆菌的突变型腺苷酸琥珀酸裂解酶,其中His141被替换,His141先前经亲和标记确定位于活性位点[Lee, T. T., Worby, C., Dixon, J. E., and Colman, R. F. (1997) J. Biol. Chem. 272, 458 - 465]。四个替换位点(A、L、E、Q)产生的突变酶没有可检测到的催化活性,而H141R突变体的活性约为野生型酶的10^(-5)。动力学研究表明,对于H141R酶,其Km仅为野生型酶的3倍。用His68替换的突变酶也观察到了最低限度的活性[Lee, T. T., Worby, C., Bao, Z. -Q., Dixon, J. E., and Colman, R. F. (1998) Biochemistry 37, 8481 - 8489]。对在68位或141位有替换的无活性突变酶进行放射性腺苷酸琥珀酸的可逆结合测量表明,它们对底物的亲和力仅降低了10 - 40倍。这些结果表明,His141与His68一样,在催化中起重要作用,但在底物结合中不起作用。证据与His141和His68分别作为催化碱和酸起作用的假设一致。对野生型以及所有His141和His68突变体进行圆二色光谱和凝胶过滤色谱分析表明,没有一个突变酶表现出主要的结构变化,并且所有酶都是四聚体。将无活性的His141与无活性的His68突变酶混合会导致催化活性显著增加。突变酶的这种互补表明His141和His68来自不同的亚基以形成活性位点。基于富马酸酶超家族中的已知结构,包括精氨琥珀酸裂解酶、δ-晶状体蛋白、富马酸酶和天冬氨酸酶,通过同源建模构建了腺苷酸琥珀酸裂解酶的四聚体结构。该模型表明每个活性位点由三个亚基的残基组成,并且His141和His68来自两个不同的亚基。