Koga Yuichi, Konishi Kanako, Kobayashi Atsushi, Kanaya Shigenori, Takano Kazufumi
Department of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan.
Department of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan.
J Biosci Bioeng. 2019 Jun;127(6):679-685. doi: 10.1016/j.jbiosc.2018.11.012. Epub 2018 Dec 21.
Glycerol-3-phosphate (G3P) is a key intermediate of glycerol metabolism and is oxidized to dihydroxyacetone phosphate aerobically or anaerobically by appropriate G3P dehydrogenases. A hyperthermophilic archaeon Thermococcus kodakarensis KOD1 has a novel operon consisting of three genes encoding an anaerobic G3P dehydrogenase (G3PDH), an NADH oxidase (NOX), and a molybdopterin oxidoreductase (MOX). Typically, the G3PDH gene (glpA) is included in an operon with genes encoding essential subunits of the G3PDH complex, glpB and glpC. The three genes from T. kodakarensis were cloned and expressed in Escherichia coli, and their recombinant proteins, Tk-G3PDH, Tk-NOX and Tk-MOX, were characterized. The optimal temperature of Tk-G3PDH for activity was 80°C, indicating high thermal stability. Tk-G3PDH has flavin adenine dinucleotide as a prosthetic group and catalyzes oxidation of G3P with k/K 1.93 × 10 Ms at 80°C, compared with 9.83 × 10 Ms for the E. coli G3PDH complex at 37°C. Interestingly, Tk-G3PDH can catalyze this reaction even as a monomer, whereas GlpA must form a complex with GlpB and GlpC. Tk-G3PDH also forms a putative heteropentamer with Tk-NOX and Tk-MOX (G3PDH:NOX:MOX = 2:2:1). This complex may form an electron transfer pathway to a final electron acceptor in the cell membrane, as is the case for the typical G3PDH complex GlpABC.
3-磷酸甘油(G3P)是甘油代谢的关键中间体,可通过适当的G3P脱氢酶在需氧或厌氧条件下氧化为磷酸二羟丙酮。嗜热古菌柯达嗜热栖热菌(Thermococcus kodakarensis)KOD1有一个新的操纵子,由三个基因组成,分别编码厌氧G3P脱氢酶(G3PDH)、NADH氧化酶(NOX)和钼蝶呤氧化还原酶(MOX)。通常,G3PDH基因(glpA)包含在一个操纵子中,该操纵子还有编码G3PDH复合物必需亚基的基因glpB和glpC。从柯达嗜热栖热菌中克隆出这三个基因并在大肠杆菌中表达,对其重组蛋白Tk-G3PDH、Tk-NOX和Tk-MOX进行了表征。Tk-G3PDH的最佳活性温度为80°C,表明其具有高热稳定性。Tk-G3PDH以黄素腺嘌呤二核苷酸为辅基,在80°C下催化G3P氧化,其k/K为1.93×10⁶M⁻¹s⁻¹,而大肠杆菌G3PDH复合物在37°C下的k/K为9.83×10⁵M⁻¹s⁻¹。有趣的是,Tk-G3PDH即使作为单体也能催化该反应,而GlpA必须与GlpB和GlpC形成复合物。Tk-G3PDH还与Tk-NOX和Tk-MOX形成假定的异源五聚体(G3PDH:NOX:MOX = 2:2:1)。这种复合物可能像典型的G3PDH复合物GlpABC一样,在细胞膜中形成一条通向最终电子受体的电子传递途径。