Department of Genetics, Yale School of Medicine, New Haven, CT 06510.
Department of Obstetrics, Gynecology & Reproductive Sciences, Yale School of Medicine, New Haven, CT 06510.
Proc Natl Acad Sci U S A. 2019 Jan 8;116(2):619-624. doi: 10.1073/pnas.1814027116. Epub 2018 Dec 24.
Ovarian cancer remains the most lethal gynecologic malignancy. We analyzed the mutational landscape of 64 primary, 41 metastatic, and 17 recurrent fresh-frozen tumors from 77 patients along with matched normal DNA, by whole-exome sequencing (WES). We also sequenced 13 pairs of synchronous bilateral ovarian cancer (SBOC) to evaluate the evolutionary history. Lastly, to search for therapeutic targets, we evaluated the activity of the Bromodomain and Extra-Terminal motif (BET) inhibitor GS-626510 on primary tumors and xenografts harboring c-MYC amplifications. In line with previous studies, the large majority of germline and somatic mutations were found in BRCA1/2 (21%) and TP53 (86%) genes, respectively. Among mutations in known cancer driver genes, 77% were transmitted from primary tumors to metastatic tumors, and 80% from primary to recurrent tumors, indicating that driver mutations are commonly retained during ovarian cancer evolution. Importantly, the number, mutation spectra, and signatures in matched primary-metastatic tumors were extremely similar, suggesting transcoelomic metastases as an early dissemination process using preexisting metastatic ability rather than an evolution model. Similarly, comparison of SBOC showed extensive sharing of somatic mutations, unequivocally indicating a common ancestry in all cases. Among the 17 patients with matched tumors, four patients gained PIK3CA amplifications and two patients gained c-MYC amplifications in the recurrent tumors, with no loss of amplification or gain of deletions. Primary cell lines and xenografts derived from chemotherapy-resistant tumors demonstrated sensitivity to JQ1 and GS-626510 ( = 0.01), suggesting that oral BET inhibitors represent a class of personalized therapeutics in patients harboring recurrent/chemotherapy-resistant disease.
卵巢癌仍然是最致命的妇科恶性肿瘤。我们通过全外显子组测序(WES)分析了 77 名患者的 64 例原发性、41 例转移性和 17 例复发性新鲜冷冻肿瘤以及匹配的正常 DNA 的突变情况。我们还对 13 对同步双侧卵巢癌(SBOC)进行了测序,以评估其进化史。最后,为了寻找治疗靶点,我们评估了 Bromodomain and Extra-Terminal motif(BET)抑制剂 GS-626510 对携带 c-MYC 扩增的原发性肿瘤和异种移植物的活性。与先前的研究一致,大多数种系和体细胞突变分别发生在 BRCA1/2(21%)和 TP53(86%)基因中。在已知的癌症驱动基因突变中,77%从原发性肿瘤传递到转移性肿瘤,80%从原发性肿瘤传递到复发性肿瘤,表明驱动突变在卵巢癌的进化过程中通常被保留下来。重要的是,配对的原发性-转移性肿瘤中的突变数量、突变谱和特征极其相似,表明转腔转移是一种早期的扩散过程,利用了预先存在的转移能力,而不是一种进化模型。同样,对 SBOC 的比较显示出广泛的体细胞突变共享,明确表明所有病例都有共同的祖先。在 17 名有匹配肿瘤的患者中,4 名患者在复发性肿瘤中获得了 PIK3CA 扩增,2 名患者获得了 c-MYC 扩增,没有扩增丢失或获得缺失。来自化疗耐药肿瘤的原代细胞系和异种移植物对 JQ1 和 GS-626510 敏感(=0.01),表明口服 BET 抑制剂代表了一类在携带复发性/化疗耐药疾病的患者中具有个性化治疗潜力的药物。
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