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[基质辅助激光解吸电离飞行时间质谱分析法在霍乱弧菌菌株鉴定及分型中的应用]

[The mass-spectrometric analysis of MALDI-TOF in identification and typing of strains of comma bacillus].

作者信息

Telesmanitch N R, Chaika S O, Chaika I A, Goncharenko E V, Lomov Yu M

出版信息

Klin Lab Diagn. 2016 Jun;61(6):375-9.

Abstract

The data base “Protein profiles of mass-specters of representatives of species of Vibrio cholerae for program MALDI Biotyper” was used to implement typing of strains of comma bacillus isolated at the territory of the Russian Federation in 2010-2012. Also, analysis of degree of similarity and differences among constant ribosomal proteins was implemented. According the results of MALDI-TOF mass-spectrometry strains of V.cholerae were grouped in two distinct clusters. The first cluster included all epidemically dangerous strains isolated from people arrived in Moscow from India 2010-2012. The second cluster included atoxigenic vibrio with no relation to serogroups O1/O139 isolated from residents of Taganrog in 2011. The analysis of main specters of all collection permitted to identify taxon - specific components distinguishing strains of non-O1/non-O139 from strains of V.cholerae El Tor. Hence, the developed data base of proteom portraits of V.cholerae permits identifying, studying and to typing of agents of cholera and other representatives of V.cholerae species detecting their phylogenetic affinity that is ultimately useful for establishing origin of strains isolated from objects of environment and epidemiological decoding of episodes of disease.

摘要

利用“用于基质辅助激光解吸电离飞行时间质谱生物分型程序的霍乱弧菌物种代表的质谱蛋白质谱”数据库,对2010 - 2012年在俄罗斯联邦境内分离出的逗号杆菌菌株进行分型。此外,还对恒定核糖体蛋白之间的相似程度和差异进行了分析。根据基质辅助激光解吸电离飞行时间质谱分析结果,霍乱弧菌菌株被分为两个不同的簇。第一个簇包括2010 - 2012年从印度抵达莫斯科的人群中分离出的所有具有流行危险性的菌株。第二个簇包括2011年从塔甘罗格居民中分离出的与O1/O139血清群无关的无毒性弧菌。对所有菌株收集物的主要质谱进行分析,有助于识别区分非O1/非O139菌株与埃尔托霍乱弧菌菌株的分类群特异性成分。因此,所建立的霍乱弧菌蛋白质组图谱数据库有助于识别、研究霍乱病原体及霍乱弧菌属的其他代表菌株,并对其进行分型,检测它们的系统发育亲缘关系,这最终有助于确定从环境样本中分离出的菌株的来源以及疾病发作的流行病学解码。

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