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果蝇多线染色体间带中开放染色质结构域的遗传组织

Genetic Organization of Open Chromatin Domains Situated in Polytene Chromosome Interbands in Drosophila.

作者信息

Zykova T Yu, Popova O O, Khoroshko V A, Levitsky V G, Lavrov S A, Zhimulev I F

机构信息

Institute of Molecular and Cell Biology, Siberian Branch, Russian Academy of Sciences, Novosibirsk, 630090, Russia.

Institute of Cytology and Genetics, Siberian Branch, Russian Academy of Sciences, Novosibirsk, 630090, Russia.

出版信息

Dokl Biochem Biophys. 2018 Nov;483(1):297-301. doi: 10.1134/S1607672918060078.

DOI:10.1134/S1607672918060078
PMID:30607724
Abstract

New data on the organization of genes entirely located in the open domains for chromatin transcription and occupying only one chromosome structure (interband) were obtained. The characteristic features of these genes are the small size (on average, 1-2 kb), depletion of the replicative complex proteins in the regulatory region, and the presence of specific motifs for binding transcription factors, as compared to the genes occupying two structures (interband and gray band). The biological function of these genes is associated primarily with the processes of gene expression and RNA metabolism.

摘要

获得了关于完全位于染色质转录开放域且仅占据一种染色体结构(间带)的基因组织的新数据。与占据两种结构(间带和灰带)的基因相比,这些基因的特征是尺寸小(平均1 - 2 kb)、调控区域中复制复合体蛋白缺失以及存在结合转录因子的特定基序。这些基因的生物学功能主要与基因表达和RNA代谢过程相关。

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引用本文的文献

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Genes Containing Long Introns Occupy Series of Bands and Interbands In polytene Chromosomes.含有长内含子的基因占据多线染色体的一系列带和带间区。
Genes (Basel). 2020 Apr 11;11(4):417. doi: 10.3390/genes11040417.
2
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本文引用的文献

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Chromatin Heterogeneity and Distribution of Regulatory Elements in the Late-Replicating Intercalary Heterochromatin Domains of Drosophila melanogaster Chromosomes.果蝇染色体晚期复制的居间异染色质区域中染色质的异质性及调控元件的分布
PLoS One. 2016 Jun 14;11(6):e0157147. doi: 10.1371/journal.pone.0157147. eCollection 2016.
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Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation.增强子-核心启动子特异性区分发育基因和管家基因的调控。
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Genetic organization of interphase chromosome bands and interbands in Drosophila melanogaster.
黑腹果蝇间期染色体带和间带的遗传组织
PLoS One. 2014 Jul 29;9(7):e101631. doi: 10.1371/journal.pone.0101631. eCollection 2014.
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Chromatin signatures of the Drosophila replication program.果蝇复制程序的染色质特征。
Genome Res. 2011 Feb;21(2):164-74. doi: 10.1101/gr.116038.110. Epub 2010 Dec 22.
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Genome-wide analysis of promoter architecture in Drosophila melanogaster.全基因组分析黑腹果蝇启动子结构。
Genome Res. 2011 Feb;21(2):182-92. doi: 10.1101/gr.112466.110. Epub 2010 Dec 22.
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Genetic organization of polytene chromosomes.多线染色体的遗传组织
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