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MIPS:植物王国进化途径中的功能动态。

MIPS: Functional dynamics in evolutionary pathways of plant kingdom.

机构信息

Agricultural and Ecological Research Unit, Biological Science Division, Indian Statistical Institute, 203, Barrackpore Trunk Road, Kolkata 700 108, India; Department of Botany, University of Kalyani, Kalyani, Nadia 741235, India.

Agricultural and Ecological Research Unit, Biological Science Division, Indian Statistical Institute, 203, Barrackpore Trunk Road, Kolkata 700 108, India.

出版信息

Genomics. 2019 Dec;111(6):1929-1945. doi: 10.1016/j.ygeno.2019.01.004. Epub 2019 Jan 17.

Abstract

The myo-inositol biosynthesis pathway triggering protein MIPS is best known for its necessity, ubiquitous nature and occurrence throughout all living kingdom. However, the functional disparity of MIPS genes in green plant is still viable. The present work considered a comprehensive genome-wide analysis from sequenced plants to identify MIPS homologs in respective organisms and their genomic architecture. Variation of MIPS gene expression in twelve different species in diverse conditions has also been analysed. All MIPS genes share a conserved sequence property in most of its coding region, but its regulatory elements, gene structure and expression network vary significantly. Phylogenetic inference confirms the evolution of MIPS from a single common algal ancestor to seed plants and acquiring functional variation through genomic control. This paper represents MIPS as a model for studying gene duplication, functional divergence and diversification events in plant lineages.

摘要

肌醇生物合成途径触发蛋白 MIPS 最为人所知的是其必要性、普遍性和在所有生物界的存在。然而,绿色植物中 MIPS 基因的功能差异仍然存在。本研究从已测序的植物中进行了全面的全基因组分析,以鉴定相应生物体中的 MIPS 同源物及其基因组结构。还分析了 12 个不同物种在不同条件下的 MIPS 基因表达变化。大多数编码区的 MIPS 基因都具有保守的序列特征,但它们的调节元件、基因结构和表达网络差异很大。系统发育推断证实,MIPS 是从单一的共同藻类祖先进化到种子植物,并通过基因组控制获得功能变异的。本文将 MIPS 作为研究植物谱系中基因复制、功能分歧和多样化事件的模型。

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