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鲍曼不动杆菌 ST25 分离株 D4 产生 K16 荚膜多糖涉及 KL16 基因簇中编码的一种新型糖基转移酶。

Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster.

机构信息

Institute of Health and Biomedical Innovation, School of Biomedical Sciences, Faculty of Health, Queensland University of Technology, Brisbane, Australia.

N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Moscow, Russia.

出版信息

Int J Biol Macromol. 2019 May 1;128:101-106. doi: 10.1016/j.ijbiomac.2019.01.080. Epub 2019 Jan 18.

Abstract

A new capsular polysaccharide (CPS) biosynthesis gene cluster, KL16, was found in the genome sequence of a clinical Acinetobacter baumannii ST25 isolate, D4. The variable part of KL16 contains a module of genes for synthesis of 5,7-diacetamido-3,5,7,9-tetradeoxy-l-glycero-l-manno-non-2-ulosonic acid (5,7-di-N-acetylpseudaminic acid, Pse5Ac7Ac), a gene encoding ItrA3 that initiates the CPS synthesis with d-GlcpNAc, and two glycosyltransferase (Gtr) genes. The K16 CPS was studied by sugar analysis and Smith degradation along with 1D and 2D H and C NMR spectroscopy, and shown to be built up of linear trisaccharide repeats containing d-galactose (d-Gal), N-acetyl-d-glucosamine (d-GlcNAc), and Pse5Ac7Ac. The d-Galp residue is linked to the d-GlcpNAc initiating sugar via a β-(1 → 3) linkage evidently formed by a Gtr5 variant, Gtr5, encoded in KL16. This reveals an altered or relaxed substrate specificity of this variant as the majority of Gtr5-type glycosyltransferases have previously been shown to form a β-d-Galp-(1 → 3)-d-GalpNAc linkage. The β-Psep5Ac7Ac-(2 → 4)-d-Galp linkage is predicted to be formed by the other glycosyltransferase, Gtr37, which does not match members of any known glycosyltransferase family.

摘要

一个新的荚膜多糖(CPS)生物合成基因簇 KL16,在一株临床分离的鲍曼不动杆菌 ST25 菌株 D4 的基因组序列中被发现。KL16 的可变部分包含一个用于合成 5,7-二乙酰氨基-3,5,7,9-四脱氧-l-甘油-l-甘露诺-2-烯酸(5,7-二-N-乙酰伪氨基糖酸,Pse5Ac7Ac)的基因模块,一个基因编码 ItrA3,它用 d-GlcpNAc 启动 CPS 合成,以及两个糖基转移酶(Gtr)基因。通过糖分析和 Smith 降解以及 1D 和 2D H 和 C NMR 光谱学研究了 K16 CPS,表明它由线性三糖重复组成,包含 d-半乳糖(d-Gal)、N-乙酰-d-葡萄糖胺(d-GlcNAc)和 Pse5Ac7Ac。d-Galp 残基通过 Gtr5 变体 Gtr5 通过 β-(1 → 3) 键连接到起始糖 d-GlcpNAc,这显然是由 KL16 编码的。这揭示了这种变体改变或放宽了底物特异性,因为大多数 Gtr5 型糖基转移酶以前已被证明形成 β-d-Galp-(1 → 3)-d-GalpNAc 键。β-Psep5Ac7Ac-(2 → 4)-d-Galp 键预计由另一个糖基转移酶 Gtr37 形成,它与任何已知糖基转移酶家族的成员都不匹配。

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