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磷酸二酯酶 PdeB 的 GGDEF 结构域介导极性地标蛋白 HubP 的募集。

The GGDEF Domain of the Phosphodiesterase PdeB in Mediates Recruitment by the Polar Landmark Protein HubP.

机构信息

Justus-Liebig Universität, Department of Microbiology and Molecular Biology, Giessen, Germany.

LOEWE Center for Synthetic Microbiology (Synmikro), Philipps Universität Marburg, Marburg, Germany.

出版信息

J Bacteriol. 2019 Mar 13;201(7). doi: 10.1128/JB.00534-18. Print 2019 Apr 1.

Abstract

Bacteria commonly exhibit a high degree of cellular organization and polarity which affect many vital processes such as replication, cell division, and motility. In and other bacteria, HubP is a polar marker protein which is involved in proper chromosome segregation, placement of the chemotaxis system, and various aspects of pilus- and flagellum-mediated motility. Here, we show that HubP also recruits a transmembrane multidomain protein, PdeB, to the flagellated cell pole. PdeB is an active phosphodiesterase and degrades the second messenger c-di-GMP. In , PdeB affects both the polar and the lateral flagellar systems at the level of function and/or transcription in response to environmental medium conditions. Mutant analysis on fluorescently labeled PdeB indicated that a diguanylate cyclase (GGDEF) domain in PdeB is strictly required for HubP-dependent localization. Bacterial two-hybrid and interaction studies on purified proteins strongly indicate that this GGDEF domain of PdeB directly interacts with the C-terminal FimV domain of HubP. Polar localization of PdeB occurs late during the cell cycle after cell division and separation and is not dependent on medium conditions. activity measurements did not reveal a difference in PdeB phosphodiesterase activities in the presence or absence of the HubP FimV domain. We hypothesize that recruitment of PdeB to the flagellated pole by HubP may create an asymmetry of c-di-GMP levels between mother and daughter cells and may assist in organization of c-di-GMP-dependent regulation within the cell. c-di-GMP-dependent signaling affects a range of processes in many bacterial species. Most bacteria harbor a plethora of proteins with domains which are potentially involved in synthesis and breakdown of c-di-GMP. A potential mechanism to elicit an appropriate c-di-GMP-dependent response is to organize the corresponding proteins in a spatiotemporal fashion. Here, we show that a major contributor to c-di-GMP levels and flagellum-mediated swimming in , PdeB, is recruited to the flagellated cell pole by the polar marker protein HubP. Polar recruitment involves a direct interaction between HubP and a GGDEF domain in PdeB, demonstrating a novel mechanism of polar targeting by the widely conserved HubP/FimV polar marker.

摘要

细菌通常表现出高度的细胞组织和极性,这影响许多重要的过程,如复制、细胞分裂和运动。在 和其他细菌中,HubP 是一种极性标记蛋白,它参与正确的染色体分离、趋化系统的定位以及菌毛和鞭毛介导的运动的各个方面。在这里,我们表明 HubP 还招募了一种跨膜多结构域蛋白 PdeB 到鞭毛细胞的极区。PdeB 是一种活性磷酸二酯酶,可降解第二信使 c-di-GMP。在 中,PdeB 根据环境介质条件,在功能和/或转录水平上影响极性和侧向鞭毛系统。荧光标记 PdeB 的突变分析表明,PdeB 中的二鸟苷酸环化酶 (GGDEF) 结构域严格需要依赖 HubP 进行定位。纯化蛋白的细菌双杂交和 相互作用研究强烈表明,PdeB 的这个 GGDEF 结构域直接与 HubP 的 C 端 FimV 结构域相互作用。PdeB 的极性定位发生在细胞分裂和分离后细胞周期的晚期,并且不依赖于介质条件。 活性测量未显示在存在或不存在 HubP FimV 结构域的情况下 PdeB 磷酸二酯酶活性的差异。我们假设 HubP 将 PdeB 募集到鞭毛极区可能会在母细胞和子细胞之间产生 c-di-GMP 水平的不对称性,并可能有助于细胞内 c-di-GMP 依赖性调节的组织。c-di-GMP 依赖性信号影响许多细菌物种的一系列过程。大多数细菌拥有大量潜在参与 c-di-GMP 合成和分解的蛋白,具有可能参与 c-di-GMP 合成和分解的结构域。引发适当的 c-di-GMP 依赖性反应的一种潜在机制是将相应的蛋白以时空方式组织起来。在这里,我们表明, 中 c-di-GMP 水平和鞭毛介导的游泳的主要贡献者 PdeB 通过极性标记蛋白 HubP 被募集到鞭毛细胞的极区。极性募集涉及 HubP 和 PdeB 中的 GGDEF 结构域之间的直接相互作用,证明了广泛保守的 HubP/FimV 极性标记物的一种新的极性靶向机制。

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