文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

犊牛粪便中 CMY-2 型β-内酰胺酶产生大肠埃希菌的携带情况及全基因组测序特征分析。

Fecal Carriage and Whole-Genome Sequencing-Assisted Characterization of CMY-2 Beta-Lactamase-Producing Escherichia coli in Calves at Czech Dairy Cow Farm.

机构信息

1 Faculty of Veterinary Medicine, Institute of Infectious Diseases and Microbiology, University of Veterinary and Pharmaceutical Sciences Brno, Brno, Czech Republic.

2 CEITEC VFU Brno, University of Veterinary and Pharmaceutical Sciences Brno, Brno, Czech Republic.

出版信息

Foodborne Pathog Dis. 2019 Jan;16(1):42-53. doi: 10.1089/fpd.2018.2531.


DOI:10.1089/fpd.2018.2531
PMID:30673354
Abstract

The study aimed to monitor the fecal shedding of cefotaxime-resistant Escherichia coli (CREC) in a cohort of healthy calves on a dairy farm with documented antimicrobial usage and to characterize selected AmpC beta-lactamase-producing E. coli isolates. Fecal samples from 13 suckling calves (1-63 d of age; 113 samples in total) were repeatedly collected and cultivated on MacConkey agar with cefotaxime (2 mg/L). Resistant colonies were counted, and one colony obtained from the highest dilution of each fecal sample was identified by matrix-assisted laser desorption-ionization time-of-flight mass spectrometry. Susceptibility to antimicrobials and production of AmpC and extended-spectrum beta-lactamase (ESBL) were tested. No ESBL-producing E. coli was found, but representative AmpC-positive E. coli isolates were subjected to further typing and whole-genome sequencing (WGS) for the analysis of clonal relationships, resistance genes, virulence factors, and plasmid replicons. High amounts of CREC were detected in the feces of all 13 calves during the study. The number of CREC colonies varied from 1.0 log to 8.0 log colony-forming unit per gram. Drops in CREC density or its discontinued shedding were recorded at the end of the study period. A total of 82 (94%, n = 87) CREC isolates were confirmed as AmpC producers and all but one showed resistance to multiple antimicrobials. Twenty-nine selected AmpC-positive E. coli isolates belonged to 12 and 13 unique rep-PCR fingerprints and pulsed-field gel electrophoresis types, respectively, highlighting the variation in E. coli genotypes in individual calves. WGS of 10 selected isolates showed diverse antimicrobial resistance and virulence gene content and the presence of a bla gene carried by an IncK2 plasmid. Clinically important multiresistant E. coli isolates belonging to emerging extraintestinal pathogenic E. coli ST69 and ST648 lineages were found. Our findings reinforce the urgency of efforts to prevent the spread of ESBL-/AmpC-producing bacteria in dairy cow farms.

摘要

本研究旨在监测一个有记录的抗菌药物使用的奶牛场中健康小牛的粪便中产头孢噻肟耐药大肠杆菌(CREC)的排出情况,并对选定的产 AmpC 型β-内酰胺酶大肠杆菌分离株进行特征描述。从 13 头哺乳期小牛(1-63 日龄;共采集 113 个粪便样本)中反复采集粪便样本并接种于含有头孢噻肟(2mg/L)的麦康凯琼脂上进行培养。计算耐药菌的数量,并从每个粪便样本的最高稀释度获得一个菌落,通过基质辅助激光解吸电离飞行时间质谱进行鉴定。检测了对抗菌药物的敏感性和 AmpC 和超广谱β-内酰胺酶(ESBL)的产生情况。未发现产 ESBL 的大肠杆菌,但选择了代表性的 AmpC 阳性大肠杆菌分离株进行进一步的分型和全基因组测序(WGS),以分析克隆关系、耐药基因、毒力因子和质粒复制子。在研究期间,所有 13 头小牛的粪便中均检测到大量的 CREC。CREC 菌落数从每克 1.0 对数到 8.0 对数菌落形成单位不等。在研究期末,记录到 CREC 密度下降或停止排出。共确认 82 株(94%,n=87)CREC 分离株为 AmpC 生产者,除一株外,所有分离株均对多种抗菌药物耐药。29 株选定的 AmpC 阳性大肠杆菌分离株分别属于 12 种和 13 种独特的重复序列 PCR 指纹图谱和脉冲场凝胶电泳类型,突出了个体小牛中大肠杆菌基因型的多样性。对 10 株选定分离株的 WGS 显示了不同的抗菌药物耐药性和毒力基因含量,以及一个位于 IncK2 质粒上的 bla 基因的存在。发现了属于新兴的肠外致病性大肠杆菌 ST69 和 ST648 谱系的临床重要的多耐药大肠杆菌分离株。我们的研究结果强调了努力防止 ESBL-/AmpC 产生菌在奶牛场传播的紧迫性。

相似文献

[1]
Fecal Carriage and Whole-Genome Sequencing-Assisted Characterization of CMY-2 Beta-Lactamase-Producing Escherichia coli in Calves at Czech Dairy Cow Farm.

Foodborne Pathog Dis. 2019-1

[2]
Prevalence and risk factors for extended-spectrum β-lactamase- and AmpC-producing Escherichia coli in dairy farms.

J Dairy Sci. 2016-11

[3]
Prevalence of Cefotaxime-Resistant Escherichia coli Isolates from Healthy Cattle and Sheep in Northern Spain: Phenotypic and Genome-Based Characterization of Antimicrobial Susceptibility.

Appl Environ Microbiol. 2020-7-20

[4]
Within-farm dynamics of ESBL/AmpC-producing Escherichia coli in veal calves: a longitudinal approach.

J Antimicrob Chemother. 2013-6-11

[5]
Prevalence and characterization of extended-spectrum beta-lactamase (ESBL)- and CMY-2-producing Escherichia coli isolates from healthy food-producing animals in Tunisia.

Foodborne Pathog Dis. 2012-11-29

[6]
Occurrence of the Colistin Resistance Gene and Additional Antibiotic Resistance Genes in ESBL/AmpC-Producing Escherichia coli from Poultry in Lebanon: A Nationwide Survey.

Microbiol Spectr. 2021-10-31

[7]
Salmonella enterica and extended-spectrum cephalosporin-resistant Escherichia coli recovered from Holstein dairy calves from 8 farms in New Brunswick, Canada.

J Dairy Sci. 2018-2-7

[8]
Short communication: Bovine mastitis caused by a multidrug-resistant, mcr-1-positive (colistin-resistant), extended-spectrum β-lactamase-producing Escherichia coli clone on a Greek dairy farm.

J Dairy Sci. 2019-11-14

[9]
Whole genome sequence analysis of antimicrobial resistance genes, multilocus sequence types and plasmid sequences in ESBL/AmpC Escherichia coli isolated from broiler caecum and meat.

Int J Food Microbiol. 2019-10-29

[10]
Association of farm-related factors with characteristics profiles of extended-spectrum β-lactamase- / plasmid-mediated AmpC β-lactamase-producing Escherichia coli isolates from German livestock farms.

Vet Microbiol. 2018-7-26

引用本文的文献

[1]
Genomic analysis of extended-spectrum beta-lactamase-producing from Czech diary calves and their caretakers.

Front Vet Sci. 2025-3-12

[2]
Genomic insights into plasmid mediated AMR genes, virulence factors and mobile genetic elements in raw milk Escherichia coli from Gujarat, India.

Sci Rep. 2025-2-21

[3]
Correlation analysis of whole genome sequencing of a pathogenic Escherichia coli strain of Inner Mongolian origin.

Sci Rep. 2024-7-5

[4]
Comparison of IncK- Plasmids in Extended-Spectrum Cephalosporin-Resistant Isolated from Poultry and Humans in Denmark, Finland, and Germany.

Antibiotics (Basel). 2024-4-10

[5]
Characterization of Escherichia coli and Other Enterobacterales Resistant to Extended-Spectrum Cephalosporins Isolated from Dairy Manure in Ontario, Canada.

Appl Environ Microbiol. 2023-2-28

[6]
Transmission routes of antibiotic resistant bacteria: a systematic review.

BMC Infect Dis. 2022-5-20

[7]
Whole Genome Sequencing Contributions and Challenges in Disease Reduction Focused on Malaria.

Biology (Basel). 2022-4-13

[8]
Invited Review: Antimicrobial Use and Antimicrobial Resistance in Pathogens Associated with Diarrhea and Pneumonia in Dairy Calves.

Animals (Basel). 2022-3-18

[9]
Prevalence and Risk Factors for ESBL/AmpC- in Pre-Weaned Dairy Calves on Dairy Farms in Germany.

Microorganisms. 2021-10-12

[10]
Surveillance of Extended-Spectrum β-Lactamase-, Cephalosporinase- and Carbapenemase-Producing Gram-Negative Bacteria in Raw Milk Filters and Healthy Dairy Cattle in Three Farms in , France.

Front Vet Sci. 2021-2-10

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索