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系统发生基因组学重新确认了从两种方蟹(十足目:短尾亚目:方蟹总科)推断出的宽额蟹属的系统发育位置。

Phylomitogenomics reconfirm the phylogenetic position of the genus Metaplax inferred from the two grapsid crabs (Decapoda: Brachyura: Grapsoidea).

机构信息

Institute of Aquatic Biology, Jiangsu Key Laboratory of Biofunctional Molecule, School of Life Sciences, Chemistry & Chemical Engineering, Jiangsu Second Normal University, Nanjing, China.

Nanjing Normal University Zhongbei College, Nanjing, China.

出版信息

PLoS One. 2019 Jan 25;14(1):e0210763. doi: 10.1371/journal.pone.0210763. eCollection 2019.

Abstract

Two new complete mitogenomes of the grapsids, Metaplax longipes Stimpson, 1858 and Nanosesarma minutum (De Man, 1887) were sequenced using next-generation sequencing (NGS). By analyzing a combination of 75 Brachyura taxa, our phylomitogenomic inferences suggested that Metaplax crab seperated earlier from the sesarmid crabs and closely related to the varunids with respect to Nanosesarma crab. It reconfirmed that the Metaplax should be removed from the Sesarmidae and assinged to the Varunidae. Additional mitogenomic comparisons including gene rearrangement and genomic organization were conducted among the 33 taxa of Grapsoidea and Ocypodoidea, and a shared rearrangement pattern between Metaplax longipes and the varunids were recovered, which also strongly supported the inference for the phylogenetic position of the Metaplax.

摘要

采用新一代测序(NGS)技术,我们对 Grapsid 目下的两种新的完全线粒体基因组,即长脚长足蟹(Metaplax longipes Stimpson,1858)和细足长足蟹(Nanosesarma minutum (De Man,1887)进行了测序。通过分析 75 种短尾类动物的分类群,我们的系统发生线粒体基因组推断表明,长脚长足蟹与 sesarmid 蟹的分离时间更早,与 varunid 蟹的亲缘关系比与 Nanosesarma 蟹的亲缘关系更近。这再次证实了长脚长足蟹应从 Sesarmidae 中移除,并归入 Varunidae。我们还对 Grapsodoidea 和 Ocypodoidea 目下的 33 个分类群进行了额外的线粒体基因组比较,包括基因重排和基因组组织,发现长脚长足蟹与 varunid 蟹之间存在共享的重排模式,这也强烈支持了长脚长足蟹的系统发生位置推断。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/01a1/6347246/4a2a1a7df8e2/pone.0210763.g001.jpg

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