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淀粉样纤维形成的新机制。

New Mechanism of Amyloid Fibril Formation.

机构信息

Group of Bioinformatics, Institute of Protein Research, Russian Academy of Sciences, Pushchino, Moscow Region, Russian Federation.

出版信息

Curr Protein Pept Sci. 2019;20(6):630-640. doi: 10.2174/1389203720666190125160937.

DOI:10.2174/1389203720666190125160937
PMID:30686252
Abstract

Polymorphism is a specific feature of the amyloid structures. We have studied the amyloid structures and the process of their formation using the synthetic and recombinant preparations of Aβ peptides and their three fragments. The fibrils of different morphology were obtained for these peptides. We suppose that fibril formation by Aβ peptides and their fragments proceeds according to the simplified scheme: destabilized monomer → ring-like oligomer → mature fibril that consists of ringlike oligomers. We are the first who did 2D reconstruction of amyloid fibrils provided that just a ringlike oligomer is the main building block in fibril of any morphology, like a cell in an organism. Taking this into account it is easy to explain the polymorphism of fibrils as well as the splitting of mature fibrils under different external actions, the branching and inhomogeneity of fibril diameters. Identification of regions in the protein chains that form the backbone of amyloid fibril is a direction in the investigation of amyloid formation. It has been demonstrated for Aβ(1-42) peptide and its fragments that their complete structure is inaccessible for the action of proteases, which is an evidence of different ways of association of ring-like oligomers with the formation of fibrils. Based on the electron microscopy and mass spectrometry data, we have proposed a molecular model of the fibril formed by both Aβ peptide and its fragments. In connection with this, the unified way of formation of fibrils by oligomers, which we have discovered, could facilitate the development of relevant fields of medicine of common action.

摘要

多态性是淀粉样结构的一个特定特征。我们使用 Aβ 肽及其三个片段的合成和重组制剂研究了淀粉样结构及其形成过程。这些肽得到了不同形态的纤维。我们假设 Aβ 肽及其片段的纤维形成遵循简化方案:不稳定的单体→环状寡聚物→由环状寡聚物组成的成熟纤维。我们是第一个对淀粉样纤维进行二维重建的人,前提是只有环状寡聚物是任何形态纤维的主要构建块,就像生物体中的细胞一样。考虑到这一点,很容易解释纤维的多态性以及成熟纤维在不同外部作用下的分裂、分支和纤维直径的不均匀性。鉴定在蛋白质链中形成淀粉样纤维骨架的区域是淀粉样形成研究的一个方向。已经证明,对于 Aβ(1-42)肽及其片段,其完整结构无法被蛋白酶作用,这证明了环状寡聚物与纤维形成的不同结合方式。基于电子显微镜和质谱数据,我们提出了由 Aβ 肽及其片段形成的纤维的分子模型。因此,我们发现的寡聚物形成纤维的统一方式可能有助于共同作用的医学相关领域的发展。

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1
New Mechanism of Amyloid Fibril Formation.淀粉样纤维形成的新机制。
Curr Protein Pept Sci. 2019;20(6):630-640. doi: 10.2174/1389203720666190125160937.
2
[Molecular mechanism of amyloid formation by Ab peptide: review of own works].[淀粉样前体蛋白肽形成淀粉样蛋白的分子机制:自身研究综述]
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To Be Fibrils or To Be Nanofilms? Oligomers Are Building Blocks for Fibril and Nanofilm Formation of Fragments of Aβ Peptide.是纤维还是纳米膜?寡聚体是 Aβ肽片段形成纤维和纳米膜的结构单元。
Langmuir. 2018 Feb 13;34(6):2332-2343. doi: 10.1021/acs.langmuir.7b03393. Epub 2018 Jan 30.
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The Mechanism Underlying Amyloid Polymorphism is Opened for Alzheimer's Disease Amyloid-β Peptide.阿尔茨海默病淀粉样β肽淀粉样多态性的潜在机制已被揭示。
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Determination of Size of Folding Nuclei of Fibrils Formed from Recombinant Aβ(1-40) Peptide.重组Aβ(1-40)肽形成的原纤维折叠核大小的测定
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Understanding amyloid fibril nucleation and aβ oligomer/drug interactions from computer simulations.从计算机模拟中理解淀粉样纤维成核和 Aβ寡聚体/药物相互作用。
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A synchrotron-based hydroxyl radical footprinting analysis of amyloid fibrils and prefibrillar intermediates with residue-specific resolution.基于同步加速器的淀粉样纤维和原纤维前体中间体的羟基自由基足迹分析,具有残基特异性分辨率。
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Unique molecular signatures of Alzheimer's disease amyloid β peptide mutations and deletion during aggregate/oligomer/fibril formation.阿尔茨海默病淀粉样β肽在聚集体/寡聚体/原纤维形成过程中突变和缺失的独特分子特征。
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Role of water in protein aggregation and amyloid polymorphism.水在蛋白质聚集和淀粉样多态性中的作用。
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Direct evidence for self-propagation of different amyloid-β fibril conformations.直接证据表明不同淀粉样β纤维构象的自我传播。
Neurodegener Dis. 2014;14(3):151-9. doi: 10.1159/000363623. Epub 2014 Oct 4.

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Prediction of Transmembrane Regions, Cholesterol, and Ganglioside Binding Sites in Amyloid-Forming Proteins Indicate Potential for Amyloid Pore Formation.淀粉样蛋白中跨膜区域、胆固醇和神经节苷脂结合位点的预测表明淀粉样蛋白孔形成的可能性。
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New Model for Stacking Monomers in Filamentous Actin from Skeletal Muscles of .从骨骼肌中的丝状肌动蛋白中堆积单体的新模型。
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Oligomers Are Promising Targets for Drug Development in the Treatment of Proteinopathies.寡聚体是蛋白质病治疗中药物开发的有前景的靶点。
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Aβ42 fibril formation from predominantly oligomeric samples suggests a link between oligomer heterogeneity and fibril polymorphism.主要为寡聚体的样本形成Aβ42原纤维表明寡聚体异质性与原纤维多态性之间存在联系。
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