Department of Biology, Lunds Universitet, Sölvegatan 37, 223 62 Lund, Sweden.
Gothenburg Global Biodiversity Centre, Box 461, 405 30 Gothenburg, Sweden.
Syst Biol. 2019 Sep 1;68(5):797-813. doi: 10.1093/sysbio/syz002.
The need for robust estimates of times of divergence is essential for downstream analyses, yet assessing this robustness is still rare. We generated a time-calibrated genus-level phylogeny of butterflies (Papilionoidea), including 994 taxa, up to 10 gene fragments and an unprecedented set of 12 fossils and 10 host-plant node calibration points. We compared marginal priors and posterior distributions to assess the relative importance of the former on the latter. This approach revealed a strong influence of the set of priors on the root age but for most calibrated nodes posterior distributions shifted from the marginal prior, indicating significant information in the molecular data set. Using a very conservative approach we estimated an origin of butterflies at 107.6 Ma, approximately equivalent to the latest Early Cretaceous, with a credibility interval ranging from 89.5 Ma (mid Late Cretaceous) to 129.5 Ma (mid Early Cretaceous). In addition, we tested the effects of changing fossil calibration priors, tree prior, different sets of calibrations and different sampling fractions but our estimate remained robust to these alternative assumptions. With 994 genera, this tree provides a comprehensive source of secondary calibrations for studies on butterflies.
对于下游分析来说,稳健的分歧时间估计是必不可少的,但评估这种稳健性仍然很少见。我们生成了一个时间校准的蝴蝶属级系统发育树(Papilionoidea),包括 994 个分类单元、10 个基因片段,以及一组前所未有的 12 个化石和 10 个宿主植物节点校准点。我们比较了边缘先验和后验分布,以评估前者对后者的相对重要性。这种方法显示出先验集对根年龄的强烈影响,但对于大多数校准节点,后验分布从边缘先验转移,表明分子数据集中有重要信息。使用非常保守的方法,我们估计蝴蝶的起源在 107.6 Ma,大约相当于最晚的早白垩世,置信区间范围从 89.5 Ma(晚白垩世中期)到 129.5 Ma(早白垩世中期)。此外,我们还测试了改变化石校准先验、树先验、不同校准集和不同采样分数的影响,但我们的估计仍然对这些替代假设具有稳健性。有了 994 个属,这棵树为蝴蝶的研究提供了一个全面的二级校准来源。