• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

高糖基化人促黄体生成激素类似物的理性设计(一种生物信息学方法)。

Rational design of hyper-glycosylated human luteinizing hormone analogs (a bioinformatics approach).

机构信息

Dept. & Center for Biotechnology Research, Semnan University of Medical Sciences, Semnan, Iran; Students Research Committee, Semnan University of Medical Sciences, Semnan, Iran.

Dept. & Center for Biotechnology Research, Semnan University of Medical Sciences, Semnan, Iran.

出版信息

Comput Biol Chem. 2019 Apr;79:16-23. doi: 10.1016/j.compbiolchem.2019.01.002. Epub 2019 Jan 3.

DOI:10.1016/j.compbiolchem.2019.01.002
PMID:30708139
Abstract

Glycoengineering is a recently used approach to extend serum half-life of valuable protein therapeutics. One aspect of glycoengineering is to introduce new N-glycosylation site (Asn-X-Thr/Ser, where X ≠ Pro) into desirable positions in the peptide backbone, resulting in the generation of hyper-glycosylated protein. In this study, human luteinizing hormone (LH) was considered for identification of the suitable positions for the addition of new N-linked glycosylation sites. A rational in silico approach was applied for prediction of structural and functional alterations caused by changes in amino acid sequence. As the first step, we explored the amino acid sequence of LH to find out desirable positions for introducing Asn or/and Thr to create new N-glycosylation sites. This exploration led to the identification of 38 potential N-glycan sites, and then the four acceptable ones were selected for further analysis. Three-dimensional (3D) structures of the selected analogs were generated and examined by the model evaluation methods. Finally, two analogs with one additional glycosylation site were suggested as the qualified analogs for hyper-glycosylation of the LH, which can be considered for further experimental investigations. Our computational strategy can reduce laborious and time-consuming experimental analyses of the analogs.

摘要

糖基工程是一种最近被用于延长有价值的蛋白质治疗药物血清半衰期的方法。糖基工程的一个方面是在肽主链的理想位置引入新的 N-糖基化位点(Asn-X-Thr/Ser,其中 X≠Pro),从而产生高糖基化的蛋白质。在这项研究中,人促黄体激素(LH)被认为是鉴定合适位置以添加新的 N 连接糖基化位点的候选蛋白。应用合理的计算方法预测氨基酸序列变化引起的结构和功能改变。作为第一步,我们探索了 LH 的氨基酸序列,以找出引入 Asn 和/或 Thr 以创建新的 N-糖基化位点的理想位置。这一探索确定了 38 个潜在的 N-聚糖位点,然后选择了四个可接受的位点进行进一步分析。通过模型评估方法生成并检查了所选类似物的三维(3D)结构。最后,建议两个具有一个额外糖基化位点的类似物作为 LH 高度糖基化的合格类似物,可进一步进行实验研究。我们的计算策略可以减少类似物繁琐和耗时的实验分析。

相似文献

1
Rational design of hyper-glycosylated human luteinizing hormone analogs (a bioinformatics approach).高糖基化人促黄体生成激素类似物的理性设计(一种生物信息学方法)。
Comput Biol Chem. 2019 Apr;79:16-23. doi: 10.1016/j.compbiolchem.2019.01.002. Epub 2019 Jan 3.
2
Rational design of hyper-glycosylated interferon beta analogs: a computational strategy for glycoengineering.高糖基化干扰素β类似物的合理设计:一种糖基工程的计算策略
J Mol Graph Model. 2015 Mar;56:31-42. doi: 10.1016/j.jmgm.2014.12.001. Epub 2014 Dec 9.
3
Rational design of hyper-glycosylated human follicle-stimulating hormone analogs (a bioinformatics approach).高糖基化人促卵泡激素类似物的合理设计(一种生物信息学方法)。
J Biomol Struct Dyn. 2022;40(19):9114-9125. doi: 10.1080/07391102.2021.1924268. Epub 2021 May 17.
4
In silico designing of hyper-glycosylated analogs for the human coagulation factor IX.人凝血因子IX高糖基化类似物的计算机辅助设计
J Mol Graph Model. 2016 Jul;68:39-47. doi: 10.1016/j.jmgm.2016.05.011. Epub 2016 Jun 7.
5
Rational design of glycoengineered interferon-β analogs with improved aggregation state: experimental validation.具有改善聚集状态的糖基工程化干扰素-β类似物的合理设计:实验验证
Protein Eng Des Sel. 2017 Jan;30(1):23-30. doi: 10.1093/protein/gzw058. Epub 2016 Nov 23.
6
Sequence differences between glycosylated and non-glycosylated Asn-X-Thr/Ser acceptor sites: implications for protein engineering.糖基化和非糖基化天冬酰胺- X -苏氨酸/丝氨酸受体位点之间的序列差异:对蛋白质工程的影响。
Protein Eng. 1990 Apr;3(5):433-42. doi: 10.1093/protein/3.5.433.
7
The amino acid following an asn-X-Ser/Thr sequon is an important determinant of N-linked core glycosylation efficiency.紧跟天冬酰胺- X -丝氨酸/苏氨酸序列之后的氨基酸是N -连接核心糖基化效率的重要决定因素。
Biochemistry. 1998 May 12;37(19):6833-7. doi: 10.1021/bi972217k.
8
Evaluation of the Biological Properties and the Enzymatic Stability of Glycosylated Luteinizing Hormone-Releasing Hormone Analogs.糖基化促黄体生成素释放激素类似物的生物学特性及酶稳定性评估
AAPS J. 2015 Sep;17(5):1135-43. doi: 10.1208/s12248-015-9769-x. Epub 2015 May 9.
9
Identification of twelve O-glycosylation sites in equine chorionic gonadotropin beta and equine luteinizing hormone ss by solid-phase Edman degradation.通过固相埃德曼降解法鉴定马绒毛膜促性腺激素β和马促黄体激素β中的12个O-糖基化位点。
Biol Reprod. 2001 Jan;64(1):136-47. doi: 10.1095/biolreprod64.1.136.
10
Regulation of N-linked core glycosylation: use of a site-directed mutagenesis approach to identify Asn-Xaa-Ser/Thr sequons that are poor oligosaccharide acceptors.N-连接核心糖基化的调控:利用定点诱变方法鉴定作为寡糖接受体能力较差的天冬酰胺-氨基酸-丝氨酸/苏氨酸序列。
Biochem J. 1997 Apr 15;323 ( Pt 2)(Pt 2):415-9. doi: 10.1042/bj3230415.

引用本文的文献

1
A new candidate epitope-based vaccine against PspA PhtD of : a computational experimental approach.一种针对 PspA PhtD 的新型候选表位疫苗:计算实验方法。
Front Cell Infect Microbiol. 2023 Nov 15;13:1271143. doi: 10.3389/fcimb.2023.1271143. eCollection 2023.
2
Glycan masking in vaccine design: Targets, immunogens and applications.糖基掩蔽在疫苗设计中的应用:靶点、免疫原和应用。
Front Immunol. 2023 Mar 23;14:1126034. doi: 10.3389/fimmu.2023.1126034. eCollection 2023.
3
Immunoinformatics-aided design of a new multi-epitope vaccine adjuvanted with domain 4 of pneumolysin against Streptococcus pneumoniae strains.
免疫信息学辅助设计一种新型多表位疫苗,该疫苗佐以肺炎溶血素第4结构域,用于针对肺炎链球菌菌株。
BMC Bioinformatics. 2023 Feb 24;24(1):67. doi: 10.1186/s12859-023-05175-6.
4
In silico designing of a novel epitope-based candidate vaccine against Streptococcus pneumoniae with introduction of a new domain of PepO as adjuvant.基于 PepO 新结构域的新型肺炎链球菌表位候选疫苗的计算机设计与免疫佐剂效应
J Transl Med. 2022 Sep 4;20(1):389. doi: 10.1186/s12967-022-03590-6.
5
Improved methanol tolerance of Rhizomucor miehei lipase based on N‑glycosylation within the α-helix region and its application in biodiesel production.基于α-螺旋区域内N-糖基化提高米黑根毛霉脂肪酶的甲醇耐受性及其在生物柴油生产中的应用
Biotechnol Biofuels. 2021 Dec 15;14(1):237. doi: 10.1186/s13068-021-02087-6.