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多种构象的结构揭示了 Nramp 转运蛋白中独特的过渡金属和质子途径。

Structures in multiple conformations reveal distinct transition metal and proton pathways in an Nramp transporter.

机构信息

Department of Molecular and Cellular Biology, Harvard University, Cambridge, United States.

出版信息

Elife. 2019 Feb 4;8:e41124. doi: 10.7554/eLife.41124.

DOI:10.7554/eLife.41124
PMID:30714568
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6398981/
Abstract

Nramp family transporters-expressed in organisms from bacteria to humans-enable uptake of essential divalent transition metals via an alternating-access mechanism that also involves proton transport. We present high-resolution structures of (Dra)Nramp in multiple conformations to provide a thorough description of the Nramp transport cycle by identifying the key intramolecular rearrangements and changes to the metal coordination sphere. Strikingly, while metal transport requires cycling from outward- to inward-open states, efficient proton transport still occurs in outward-locked (but not inward-locked) DraNramp. We propose a model in which metal and proton enter the transporter via the same external pathway to the binding site, but follow separate routes to the cytoplasm, which could facilitate the co-transport of two cationic species. Our results illustrate the flexibility of the LeuT fold to support a broad range of substrate transport and conformational change mechanisms.

摘要

Nramp 家族转运蛋白——从细菌到人类的生物体中均有表达——通过涉及质子转运的交替存取机制,使必需的二价过渡金属得以摄取。我们呈现了多个构象的 (Dra)Nramp 的高分辨率结构,通过确定关键的分子内重排和金属配位球的变化,全面描述了 Nramp 转运循环。引人注目的是,尽管金属转运需要从外向开放状态循环到内向开放状态,但在向外锁定(而非向内锁定)的 DraNramp 中仍能有效进行质子转运。我们提出了一个模型,其中金属和质子通过相同的外部途径进入转运蛋白的结合位点,但沿着不同的路径进入细胞质,这可能有助于两种阳离子物质的共转运。我们的结果说明了 LeuT 折叠的灵活性,能够支持广泛的底物转运和构象变化机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/8439ff746517/elife-41124-fig5-figsupp3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/046509539f19/elife-41124-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/d4782a3e845c/elife-41124-fig1-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/b6874df68de7/elife-41124-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/9ca0747aebae/elife-41124-fig2-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/232239a7290e/elife-41124-fig2-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/61eb9fcc0fd0/elife-41124-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/d28d9e9676a5/elife-41124-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/e6143700aa9a/elife-41124-fig4-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/f8d242c9dab3/elife-41124-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/5b7b8036fa50/elife-41124-fig5-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/2eaebe1f8336/elife-41124-fig5-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/8439ff746517/elife-41124-fig5-figsupp3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/046509539f19/elife-41124-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/d4782a3e845c/elife-41124-fig1-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/b6874df68de7/elife-41124-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/9ca0747aebae/elife-41124-fig2-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/232239a7290e/elife-41124-fig2-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/61eb9fcc0fd0/elife-41124-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/d28d9e9676a5/elife-41124-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/e6143700aa9a/elife-41124-fig4-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/f8d242c9dab3/elife-41124-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/5b7b8036fa50/elife-41124-fig5-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/2eaebe1f8336/elife-41124-fig5-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0205/6398981/8439ff746517/elife-41124-fig5-figsupp3.jpg

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