Dutta B, Gitaitis R D, Sanders F H, Booth C, Smith S, Langston D B
Department of Plant Pathology, University of Georgia, Tifton 31793.
Plant Dis. 2013 Oct;97(10):1375. doi: 10.1094/PDIS-03-13-0317-PDN.
In August 2012, a commercial pumpkin (Cucurbita maxima L. cv. Neon) field in Terrell County, GA, had a disease outbreak that caused severe symptoms on leaves and fruits. Leaves displayed small (2 to 3 mm), angular, water-soaked, yellow lesions while fruits had small (2 to 3 mm), sunken, circular, dry lesions. The field exhibited 40% disease incidence with observable symptoms on fruits. In severe cases, fruit rots were also observed. Symptomatic leaves and fruits were collected from 25 pumpkin plants and isolations were made on both nutrient agar and yeast extract-dextrose-CaCO (YDC) agar medium (1). Xanthomonad-like yellow colonies were observed on both agar plates and colonies appeared mucoid on YDC. Suspect bacteria were gram-negative, oxidase positive, hydrolyzed starch and esculin, formed pits on both crystal violet pectate and carboxymethyl cellulose media, but were indole negative and did not produce nitrites from nitrates. Bacterial isolates also produced hypersensitive reactions on tobacco when inoculated with a bacterial suspension of 1 × 10 CFU/ml. Identity of the isolates were identified as genus Xanthomonas by using primers RST2 (5'AGGCCCTGGAAGGTGCCCTGGA3') and RST3 (5'ATCGCACTGCGTACCGCGCGCGA3') in a conventional PCR assay, which produced an 840-bp band. The 16S rRNA gene of five isolates was amplified using universal primers fD1 and rD1 (3) and amplified products were sequenced and compared using BLAST in GenBank. The nucleotide sequences (1,200 bp) of the isolates matched Xanthomonas cucurbitae (GenBank Accession AB680438.1), X. campestris (HQ256868.1), X. campestris pv. campestris (NR074936.1), X. hortorum (AB775942.1), and X. campestris pv. raphani (CP002789.1) with 99% similarity. PCR amplification and sequencing of a housekeeping gene atpD (ATP synthase, 720 bp) showed 98% similarity with X. cucurbitae (HM568911.1). Since X. cucurbitae was not listed in the BIOLOG database (Biolog, Hayward, CA), substrate utilization tests for three pumpkin isolates were compared with utilization patterns of Xanthomonas groups using BIOLOG reported by Vauterin et al. (4). The isolates showed 94.7, 93.7, and 92.6% similarity to the reported metabolic profiles of X. campestris, X. cucurbitae, and X. hortorum, respectively, of Xanthomonas groups 15, 8, and 2. However, PCR assay with X. campestris- and X. raphani-specific primers (3) did not amplify the pumpkin isolates, indicating a closer relationship with X. cucurbitae. Spray inoculations of five bacterial isolates in suspensions containing 1 × 10 CFU/ml on 2-week-old pumpkin seedlings (cv. Lumina) (n = five seedlings/isolate/experiment) under greenhouse conditions of 30°C and 70% RH produced typical yellow leaf spot symptoms on 100% of the seedlings. Seedlings (n = 10) spray-inoculated with sterile water were asymptomatic. Reisolated bacterial colonies from symptomatic seedlings displayed similar characteristics to those described above. Further confirmation of bacterial identity was achieved by amplifying and sequencing the 16S rRNA gene, which showed 98 to 99% similarity to X cucurbitae accessions in GenBank. To our knowledge, this is the first report of X. cucurbitae on pumpkin in Georgia. As this bacterium is known to be seedborne, it is possible that the pathogen might have introduced through contaminated seeds. References: (1) N. W. Schaad et al. Laboratory Guide for the Identification of Plant Pathogenic Bacteria, third edition. APS Press. St. Paul, MN, 2001. (2) Y. Besancon et al. Biotechnol. Appl. Biochem. 20:131, 1994. (3) Leu et al. Plant Pathol. Bull. 19:137, 2010. (4) Vauterin et al. Int. J. Syst. Bacteriol. 45:472, 1995.
2012年8月,佐治亚州特雷尔县的一块商业南瓜(南瓜属 maxima L. 品种 Neon)田发生了病害爆发,导致叶片和果实出现严重症状。叶片上出现小的(2至3毫米)、角状、水渍状、黄色病斑,而果实上则有小的(2至3毫米)、凹陷、圆形、干燥病斑。该田地的发病率为40%,果实上有明显症状。在严重的情况下,还观察到果实腐烂。从25株南瓜植株上采集了有症状的叶片和果实,并在营养琼脂和酵母提取物 - 葡萄糖 - 碳酸钙(YDC)琼脂培养基上进行分离培养(1)。在两种琼脂平板上均观察到类似黄单胞菌的黄色菌落,且在YDC上菌落呈黏液状。疑似细菌革兰氏阴性、氧化酶阳性、能水解淀粉和七叶苷,在结晶紫果胶和羧甲基纤维素培养基上形成凹陷,但吲哚阴性且不能从硝酸盐产生亚硝酸盐。当用1×10 CFU/ml的细菌悬液接种时,细菌分离物在烟草上也产生过敏反应。在常规PCR分析中,使用引物RST2(5'AGGCCCTGGAAGGTGCCCTGGA3')和RST3(5'ATCGCACTGCGTACCGCGCGCGA3')将分离物鉴定为黄单胞菌属,产生了一条840 bp的条带。使用通用引物fD1和rD1(3)扩增了五个分离物的16S rRNA基因,并对扩增产物进行测序,然后在GenBank中使用BLAST进行比较。分离物的核苷酸序列(1200 bp)与南瓜黄单胞菌(GenBank登录号AB680438.1)、野油菜黄单胞菌(HQ256868.1)、野油菜黄单胞菌野油菜致病变种(NR074936.1)、园艺黄单胞菌(AB775942.1)和野油菜黄单胞菌萝卜致病变种(CP002789.1)的相似性为99%。看家基因atpD(ATP合酶,720 bp)的PCR扩增和测序显示与南瓜黄单胞菌(HM568911.1)的相似性为98%。由于南瓜黄单胞菌未列入BIOLOG数据库(BIOLOG,海沃德,加利福尼亚州),使用Vauterin等人(4)报道的BIOLOG对三个南瓜分离物的底物利用测试与黄单胞菌群的利用模式进行了比较。分离物与黄单胞菌属第15、8和2组的野油菜黄单胞菌、南瓜黄单胞菌和园艺黄单胞菌报道的代谢谱的相似性分别为94.7%、93.7%和92.6%。然而,使用野油菜黄单胞菌和萝卜黄单胞菌特异性引物(3)的PCR分析未扩增出南瓜分离物,表明与南瓜黄单胞菌关系更密切。在3