Chen Fanbing, Jin Wensong, Gao Huifang, Guo Zewang, Lin Hui, Li Jiahuan, Hu Kaihui, Guan Xiong, Kalia Vipin C, Lee Jung-Kul, Zhang Liaoyuan, Li Yongyu
1College of Life Sciences, Gutian Edible Fungi Research Institute, Fujian Agriculture and Forestry University, Fuzhou, 350002 People's Republic of China.
2Department of Chemical Engineering, Konkuk University, Seoul, 05029 Republic of Korea.
Indian J Microbiol. 2019 Mar;59(1):64-72. doi: 10.1007/s12088-018-0773-6. Epub 2018 Dec 28.
Bacterial strains from karst landform soil were enriched via chemostat culture in the presence of sodium bicarbonate. Two chemolithotrophic strains were isolated and identified as Wy064 and sp. Wy065. Both strains could grow using sodium bicarbonate as the sole carbon source. Furthermore, the supplement of the medium with three electron donors (NaS, NaNO, and NaSO) improved the growth of both strains. The activities of carbonic anhydrase (CA) and ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) could be detected in the crude enzyme of strain Wy064, implying that the strain Wy064 might employ Calvin cycle to fix CO. genome mining revealed four potential genes designated -. The proteins encoded by genes - were cloned and expressed in . The purified recombinant enzymes of CA1 and CA3 exhibited CO hydration activities, whereas enzyme CA2 was expressed in inclusion bodies. A CO hydration assay demonstrated that the specific activity of CA3 was significantly higher than that of CA1. The maximum CO hydration activities for CA1 and CA3 were observed at pH 7.5 and 40 °C. The activities of CA1 and CA3 were significantly enhanced by several metal ions, especially Zn, which resulted in 21.1-fold and 26.1-fold increases of CO hydration activities, respectively. The apparent and for CO as substrate were 27 mM and 179 WAU/mg for CA1, and 14 mM and 247 WAU/mg for CA3, respectively. Structure modeling combined with sequence analysis indicated that CA1 and CA3 should belong to the Type II β-CA.
在碳酸氢钠存在的情况下,通过恒化器培养对来自喀斯特地貌土壤的细菌菌株进行富集。分离出两株化能自养菌株,分别鉴定为Wy064和Wy065菌。两株菌株都可以利用碳酸氢钠作为唯一碳源生长。此外,向培养基中添加三种电子供体(NaS、NaNO和NaSO)可促进两株菌株的生长。在菌株Wy064的粗酶中可检测到碳酸酐酶(CA)和核酮糖-1,5-二磷酸羧化酶/加氧酶(RuBisCO)的活性,这意味着菌株Wy064可能利用卡尔文循环固定CO。基因组挖掘发现了四个潜在基因,命名为-。对基因-编码的蛋白质进行克隆并在中表达。纯化后的重组酶CA1和CA3表现出CO水合活性,而酶CA2以包涵体形式表达。CO水合活性测定表明,CA3的比活性显著高于CA1。CA1和CA3的最大CO水合活性分别在pH 7.5和40℃时观察到。几种金属离子可显著提高CA1和CA3的活性,尤其是Zn,分别使CO水合活性提高了21.1倍和26.1倍。以CO为底物时,CA1的表观Km和Vmax分别为27 mM和179 WAU/mg,CA3的表观Km和Vmax分别为14 mM和247 WAU/mg。结构建模结合序列分析表明,CA1和CA^{3}应属于II型β-CA。