• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

在植物中从双顺反子转录本协调表达细胞周期调节剂和代谢酶。

Concerted expression of a cell cycle regulator and a metabolic enzyme from a bicistronic transcript in plants.

机构信息

Structural Plant Biology Laboratory, Department of Botany and Plant Biology, University of Geneva, Geneva, Switzerland.

Friedrich Miescher Laboratory of the Max Planck Society, Tübingen, Germany.

出版信息

Nat Plants. 2019 Feb;5(2):184-193. doi: 10.1038/s41477-019-0358-3. Epub 2019 Feb 8.

DOI:10.1038/s41477-019-0358-3
PMID:30737513
Abstract

Eukaryotic mRNAs frequently contain upstream open reading frames (uORFs), encoding small peptides that may control translation of the main ORF (mORF). Here, we report the characterization of a distinct bicistronic transcript in Arabidopsis. We analysed loss-of-function phenotypes of the inorganic polyphosphatase TRIPHOSPHATE TUNNEL METALLOENZYME 3 (AtTTM3), and found that catalytically inactive versions of the enzyme could fully complement embryo and growth-related phenotypes. We could rationalize these puzzling findings by characterizing a uORF in the AtTTM3 locus encoding CELL DIVISION CYCLE PROTEIN 26 (CDC26), an orthologue of the cell cycle regulator. We demonstrate that AtCDC26 is part of the plant anaphase promoting complex/cyclosome (APC/C), regulates accumulation of APC/C target proteins and controls cell division, growth and embryo development. AtCDC26 and AtTTM3 are translated from a single transcript conserved across the plant lineage. While there is no apparent biochemical connection between the two gene products, AtTTM3 coordinates AtCDC26 translation by recruiting the transcript into polysomes. Our work highlights that uORFs may encode functional proteins in plant genomes.

摘要

真核生物 mRNA 经常包含上游开放阅读框 (uORF),其编码的小肽可能控制主要 ORF (mORF) 的翻译。在这里,我们报告了拟南芥中一种独特的双顺反子转录本的特征。我们分析了无机多磷酸盐隧道金属酶 3 (AtTTM3) 的无功能表型,发现该酶的催化失活版本可以完全弥补胚胎和生长相关的表型。通过对 AtTTM3 基因座中编码细胞分裂周期蛋白 26 (CDC26) 的 uORF 的特征分析,我们可以合理地解释这些令人困惑的发现,CDC26 是细胞周期调节剂的同源物。我们证明 AtCDC26 是植物后期促进复合物/细胞周期蛋白体 (APC/C) 的一部分,调节 APC/C 靶蛋白的积累,并控制细胞分裂、生长和胚胎发育。AtCDC26 和 AtTTM3 由横跨植物谱系保守的单个转录本翻译而来。虽然两个基因产物之间没有明显的生化联系,但 AtTTM3 通过将转录本募集到多核糖体上来协调 AtCDC26 的翻译。我们的工作强调了 uORF 可能在植物基因组中编码功能性蛋白质。

相似文献

1
Concerted expression of a cell cycle regulator and a metabolic enzyme from a bicistronic transcript in plants.在植物中从双顺反子转录本协调表达细胞周期调节剂和代谢酶。
Nat Plants. 2019 Feb;5(2):184-193. doi: 10.1038/s41477-019-0358-3. Epub 2019 Feb 8.
2
The Arabidopsis APC4 subunit of the anaphase-promoting complex/cyclosome (APC/C) is critical for both female gametogenesis and embryogenesis.拟南芥有丝分裂促进复合物/周期蛋白(APC/C)的 APC4 亚基对于雌性配子体发生和胚胎发生都是至关重要的。
Plant J. 2012 Jan;69(2):227-40. doi: 10.1111/j.1365-313X.2011.04785.x. Epub 2011 Oct 21.
3
Crystal structure and biochemical analyses reveal that the Arabidopsis triphosphate tunnel metalloenzyme AtTTM3 is a tripolyphosphatase involved in root development.晶体结构和生化分析表明,拟南芥三磷酸隧道金属酶 AtTTM3 是一种参与根发育的三聚磷酸酶。
Plant J. 2013 Nov;76(4):615-26. doi: 10.1111/tpj.12325. Epub 2013 Oct 17.
4
Identification of Arabidopsis thaliana upstream open reading frames encoding peptide sequences that cause ribosomal arrest.鉴定编码导致核糖体停滞的肽序列的拟南芥上游开放阅读框。
Nucleic Acids Res. 2017 Sep 6;45(15):8844-8858. doi: 10.1093/nar/gkx528.
5
Arabidopsis Fhit-like tumor suppressor resumes early terminated constitutive triple response1-10 mRNA translation.拟南芥Fhit样肿瘤抑制因子恢复提前终止的组成型三重反应1-10 mRNA翻译。
Plant Physiol. 2024 Jun 28;195(3):2073-2093. doi: 10.1093/plphys/kiae192.
6
The upstream open reading frame of the Arabidopsis AtMHX gene has a strong impact on transcript accumulation through the nonsense-mediated mRNA decay pathway.拟南芥 AtMHX 基因的上游开放阅读框通过无义介导的 mRNA 降解途径对转录物积累有很强的影响。
Plant J. 2009 Dec;60(6):1031-42. doi: 10.1111/j.1365-313X.2009.04021.x.
7
Identification of novel Arabidopsis thaliana upstream open reading frames that control expression of the main coding sequences in a peptide sequence-dependent manner.鉴定以肽序列依赖性方式控制主要编码序列表达的新型拟南芥上游开放阅读框。
Nucleic Acids Res. 2015 Feb 18;43(3):1562-76. doi: 10.1093/nar/gkv018. Epub 2015 Jan 23.
8
Novel pipeline identifies new upstream ORFs and non-AUG initiating main ORFs with conserved amino acid sequences in the 5' leader of mRNAs in .新型管道在. 的 mRNA 5' 先导区中识别出具有保守氨基酸序列的新上游 ORF 和非 AUG 起始的主要 ORF。
RNA. 2019 Mar;25(3):292-304. doi: 10.1261/rna.067983.118. Epub 2018 Dec 19.
9
Arabidopsis Polyamine oxidase-2 uORF is required for downstream translational regulation.拟南芥多胺氧化酶-2上游开放阅读框是下游翻译调控所必需的。
Plant Physiol Biochem. 2016 Nov;108:381-390. doi: 10.1016/j.plaphy.2016.08.006. Epub 2016 Aug 5.
10
Tissue-Specific Control of the Endocycle by the Anaphase Promoting Complex/Cyclosome Inhibitors UVI4 and DEL1.后期促进复合物/细胞周期体抑制剂UVI4和DEL1对细胞内复制周期的组织特异性调控
Plant Physiol. 2017 Sep;175(1):303-313. doi: 10.1104/pp.17.00785. Epub 2017 Jul 11.

引用本文的文献

1
CLAVATA signalling shapes barley inflorescence by controlling activity and determinacy of shoot meristem and rachilla.CLAVATA信号通路通过控制茎尖分生组织和小穗轴的活性及确定性来塑造大麦花序。
Nat Commun. 2025 Apr 26;16(1):3937. doi: 10.1038/s41467-025-59330-z.
2
Leaky ribosomal scanning enables tunable translation of bicistronic ORFs in green algae.渗漏核糖体扫描使绿藻中双顺反子开放阅读框的翻译具有可调性。
Proc Natl Acad Sci U S A. 2025 Mar 4;122(9):e2417695122. doi: 10.1073/pnas.2417695122. Epub 2025 Feb 26.
3
Leaky ribosomal scanning enables tunable translation of bicistronic ORFs in green algae.

本文引用的文献

1
Recent Discoveries on the Role of TOR (Target of Rapamycin) Signaling in Translation in Plants.近年来关于 TOR(雷帕霉素靶蛋白)信号在植物翻译中的作用的新发现。
Plant Physiol. 2018 Feb;176(2):1095-1105. doi: 10.1104/pp.17.01243. Epub 2017 Nov 9.
2
Polyphosphate granule biogenesis is temporally and functionally tied to cell cycle exit during starvation in .多磷酸盐颗粒生物发生在 细胞饥饿时与细胞周期退出在时间和功能上相关联。
Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):E2440-E2449. doi: 10.1073/pnas.1615575114. Epub 2017 Mar 6.
3
pKAMA-ITACHI Vectors for Highly Efficient CRISPR/Cas9-Mediated Gene Knockout in Arabidopsis thaliana.
渗漏核糖体扫描能够实现绿藻中双顺反子开放阅读框的可调翻译。
bioRxiv. 2024 Jul 25:2024.07.24.605010. doi: 10.1101/2024.07.24.605010.
4
Spinach genomes reveal migration history and candidate genes for important crop traits.菠菜基因组揭示了其迁移历史以及重要作物性状的候选基因。
NAR Genom Bioinform. 2024 Apr 17;6(2):lqae034. doi: 10.1093/nargab/lqae034. eCollection 2024 Jun.
5
What, where, and how: Regulation of translation and the translational landscape in plants.什么、哪里和如何:植物中转录和翻译景观的调控。
Plant Cell. 2024 May 1;36(5):1540-1564. doi: 10.1093/plcell/koad197.
6
Triphosphate Tunnel Metalloenzyme 2 Acts as a Downstream Factor of ABI4 in ABA-Mediated Seed Germination.三磷酸核苷隧道金属酶 2 作为 ABI4 在 ABA 介导的种子萌发中的下游因子发挥作用。
Int J Mol Sci. 2023 May 19;24(10):8994. doi: 10.3390/ijms24108994.
7
The role of APC/C in cell cycle dynamics, growth and development in cereal crops.后期促进复合体/细胞周期体(APC/C)在谷类作物细胞周期动态、生长和发育中的作用。
Front Plant Sci. 2022 Sep 29;13:987919. doi: 10.3389/fpls.2022.987919. eCollection 2022.
8
Genome-wide association study of traits in sacred lotus uncovers MITE-associated variants underlying stamen petaloid and petal number variations.对荷花性状的全基因组关联研究揭示了与雄蕊瓣化和花瓣数量变异相关的微小反向重复转座元件(MITE)关联变异。
Front Plant Sci. 2022 Sep 23;13:973347. doi: 10.3389/fpls.2022.973347. eCollection 2022.
9
The Role of Anaphase-Promoting Complex/Cyclosome (APC/C) in Plant Reproduction.后期促进复合物/细胞周期体(APC/C)在植物繁殖中的作用
Front Plant Sci. 2021 Feb 24;12:642934. doi: 10.3389/fpls.2021.642934. eCollection 2021.
10
Characterization of Bicistronic Transcription in Budding Yeast.芽殖酵母中双顺反子转录的表征
mSystems. 2021 Feb 23;6(1):e01002-20. doi: 10.1128/mSystems.01002-20.
用于拟南芥中高效CRISPR/Cas9介导的基因敲除的pKAMA-ITACHI载体
Plant Cell Physiol. 2017 Jan 1;58(1):46-56. doi: 10.1093/pcp/pcw191.
4
High-throughput discovery of novel developmental phenotypes.新型发育表型的高通量发现
Nature. 2016 Sep 22;537(7621):508-514. doi: 10.1038/nature19356. Epub 2016 Sep 14.
5
Polyphosphate is involved in cell cycle progression and genomic stability in Saccharomyces cerevisiae.多聚磷酸盐参与酿酒酵母的细胞周期进程和基因组稳定性。
Mol Microbiol. 2016 Aug;101(3):367-80. doi: 10.1111/mmi.13396. Epub 2016 May 3.
6
Upstream ORFs are prevalent translational repressors in vertebrates.上游开放阅读框是脊椎动物中普遍存在的翻译抑制因子。
EMBO J. 2016 Apr 1;35(7):706-23. doi: 10.15252/embj.201592759. Epub 2016 Feb 19.
7
Translation from the 5' untranslated region shapes the integrated stress response.来自5'非翻译区的翻译塑造了整合应激反应。
Science. 2016 Jan 29;351(6272):aad3867. doi: 10.1126/science.aad3867.
8
Death of a dogma: eukaryotic mRNAs can code for more than one protein.一个教条的终结:真核生物的信使核糖核酸可编码不止一种蛋白质。
Nucleic Acids Res. 2016 Jan 8;44(1):14-23. doi: 10.1093/nar/gkv1218. Epub 2015 Nov 17.
9
ClearSee: a rapid optical clearing reagent for whole-plant fluorescence imaging.ClearSee:一种用于全株荧光成像的快速光学透明试剂。
Development. 2015 Dec 1;142(23):4168-79. doi: 10.1242/dev.127613. Epub 2015 Oct 22.
10
Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.三磷酸隧道金属酶中底物结合与催化的结构决定因素
J Biol Chem. 2015 Sep 18;290(38):23348-60. doi: 10.1074/jbc.M115.674473. Epub 2015 Jul 28.