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酵母中膜蛋白的生产:为生产人类膜蛋白对酵母膜进行的修饰

Membrane Protein Production in Yeast: Modification of Yeast Membranes for Human Membrane Protein Production.

作者信息

Emmerstorfer-Augustin Anita, Wriessnegger Tamara, Hirz Melanie, Zellnig Guenther, Pichler Harald

机构信息

Division of Biochemistry, Biophysics and Structural Biology, Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA.

acib-Austrian Centre of Industrial Biotechnology, Graz, Austria.

出版信息

Methods Mol Biol. 2019;1923:265-285. doi: 10.1007/978-1-4939-9024-5_12.

DOI:10.1007/978-1-4939-9024-5_12
PMID:30737745
Abstract

Approximately 30% of the genes in the human genome code for membrane proteins, and yet we know relatively little about these complex molecules. Therefore, the biochemical and structural characterization of this challenging class of proteins represents an important frontier in both fundamental research and advances in drug discovery. However, due to their unique physical properties and requirement for association with cellular membranes, expression in heterologous systems is often daunting. In this chapter we describe how to engineer the yeast Pichia pastoris to obtain humanized sterol compositions. By implementing some simple genetic engineering approaches, P. pastoris can be reprogrammed to mainly produce cholesterol instead of ergosterol. We show how to apply mass spectrometry to confirm the production of cholesterol instead of ergosterol and how we have further analyzed the strain by electron microscopy. Finally, we delineate how to apply and test the cholesterol-forming P. pastoris strain for functional expression of mammalian Na,K-ATPase α3β1 isoform. Na,K-ATPases have been shown to specifically interact with cholesterol and phospholipids, and, obviously, the presence of cholesterol instead of ergosterol was the key to stabilizing correct localization and activity of this ion transporter.

摘要

人类基因组中约30%的基因编码膜蛋白,但我们对这些复杂分子的了解相对较少。因此,对这类具有挑战性的蛋白质进行生化和结构表征是基础研究和药物发现进展中的一个重要前沿领域。然而,由于它们独特的物理性质以及与细胞膜结合的要求,在异源系统中表达往往具有挑战性。在本章中,我们描述了如何改造酵母毕赤酵母以获得人源化的甾醇组成。通过实施一些简单的基因工程方法,毕赤酵母可以被重新编程以主要产生胆固醇而非麦角固醇。我们展示了如何应用质谱法确认胆固醇而非麦角固醇的产生,以及我们如何通过电子显微镜对该菌株进行进一步分析。最后,我们阐述了如何应用和测试产生胆固醇的毕赤酵母菌株用于哺乳动物钠钾ATP酶α3β1亚型的功能表达。钠钾ATP酶已被证明能与胆固醇和磷脂特异性相互作用,显然,胆固醇而非麦角固醇的存在是稳定该离子转运体正确定位和活性的关键。

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1
Membrane Protein Production in Yeast: Modification of Yeast Membranes for Human Membrane Protein Production.酵母中膜蛋白的生产:为生产人类膜蛋白对酵母膜进行的修饰
Methods Mol Biol. 2019;1923:265-285. doi: 10.1007/978-1-4939-9024-5_12.
2
A novel cholesterol-producing Pichia pastoris strain is an ideal host for functional expression of human Na,K-ATPase α3β1 isoform.一株新型产胆固醇毕赤酵母菌株是表达人 Na,K-ATPase α3β1 同工型的理想宿主。
Appl Microbiol Biotechnol. 2013 Nov;97(21):9465-78. doi: 10.1007/s00253-013-5156-7. Epub 2013 Aug 17.
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Stabilization of Na(+),K(+)-ATPase purified from Pichia pastoris membranes by specific interactions with lipids.通过与脂质的特异性相互作用对从毕赤酵母细胞膜中纯化的Na(+),K(+)-ATP酶进行稳定化。
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Isolation and characterization of the plasma membrane from the yeast Pichia pastoris.来自巴斯德毕赤酵母的质膜的分离与特性分析。
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Effect of sterol composition on the activity of the yeast G-protein-coupled receptor Ste2.甾醇组成对酵母 G 蛋白偶联受体 Ste2 活性的影响。
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Purification of the human alpha2 Isoform of Na,K-ATPase expressed in Pichia pastoris. Stabilization by lipids and FXYD1.在毕赤酵母中表达的人Na,K-ATP酶α2同工型的纯化。脂质和FXYD1的稳定作用。
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Yeast as a tool for membrane protein production and structure determination.酵母作为生产膜蛋白和确定其结构的工具。
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Effect of ergosterol on the interlamellar spacing of deuterated yeast phospholipid multilayers.麦角固醇对氘代酵母磷脂多层膜层间距的影响。
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Expression of the alpha3/beta1 isoform of human Na,K-ATPase in the methylotrophic yeast Pichia pastoris.人钠钾ATP酶α3/β1亚型在甲基营养型酵母毕赤酵母中的表达
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Sterol synergism in yeast.酵母中的固醇协同作用。
Proc Natl Acad Sci U S A. 1983 Feb;80(3):712-5. doi: 10.1073/pnas.80.3.712.

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Applying the auxin-based degron system for the inducible, reversible and complete protein degradation in .应用基于生长素的降解子系统实现诱导性、可逆性和完全性蛋白质降解。
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Heterologous (Over) Expression of Human SoLute Carrier (SLC) in Yeast: A Well-Recognized Tool for Human Transporter Function/Structure Studies.
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Life (Basel). 2022 Aug 8;12(8):1206. doi: 10.3390/life12081206.
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Smoothing membrane protein structure determination by initial upstream stage improvements.通过初始上游阶段改进来平滑膜蛋白结构测定。
Appl Microbiol Biotechnol. 2019 Jul;103(14):5483-5500. doi: 10.1007/s00253-019-09873-1. Epub 2019 May 24.