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基于计算机的催乳素分子预测作为马科动物基因组学繁殖的工具。

In silico prediction of prolactin molecules as a tool for equine genomics reproduction.

机构信息

Grupo de Pesquisa em Genômica de Equinos - GenE, Núcleo de Biotecnologia, Centro de Desenvolvimento Tecnológico, Campus Universitário, Universidade Federal de Pelotas, Pelotas, Rio Grande do Sul, Caixa Postal 96010-900, Brazil.

Laboratório de Bioinformática e Proteômica, Núcleo de Biotecnologia, Centro de Desenvolvimento Tecnológico, Campus Universitário, Universidade Federal de Pelotas, Pelotas, Rio Grande do Sul, Caixa Postal 96010-900, Brazil.

出版信息

Mol Divers. 2019 Nov;23(4):1019-1028. doi: 10.1007/s11030-018-09914-3. Epub 2019 Feb 10.

DOI:10.1007/s11030-018-09914-3
PMID:30740642
Abstract

The prolactin hormone is involved in several biological functions, although its main role resides on reproduction. As it interferes on fertility changes, studies focused on human health have established a linkage of this hormone to fertility losses. Regarding animal research, there is still a lack of information about the structure of prolactin. In case of horse breeding, prolactin has a particular influence; once there is an individualization of these animals and equines are known for presenting several reproductive disorders. As there is no molecular structure available for the prolactin hormone and receptor, we performed several bioinformatics analyses through prediction and refinement softwares, as well as manual modifications. Aiming to elucidate the first computational structure of both molecules and analyse structural and functional aspects related to these proteins, here we provide the first known equine model for prolactin and prolactin receptor, which obtained high global quality scores in diverse software's for quality assessment. QMEAN overall score obtained for ePrl was (- 4.09) and QMEANbrane for ePrlr was (- 8.45), which proves the structures' reliability. This study will implement another tool in equine genomics in order to give light to interactions of these molecules, structural and functional alterations and therefore help diagnosing fertility problems, contributing in the selection of a high genetic herd.

摘要

催乳素激素参与多种生物学功能,尽管其主要作用在于生殖。由于它会影响生育力的变化,因此针对人类健康的研究已经确定了这种激素与生育力丧失之间的联系。就动物研究而言,关于催乳素的结构仍然缺乏信息。在马的繁殖中,催乳素具有特殊的影响;一旦对这些动物进行个体化,就会发现马类动物存在多种生殖障碍。由于催乳素激素和受体没有可用的分子结构,我们通过预测和精修软件以及手动修改进行了多次生物信息学分析。为了阐明这两种分子的第一个计算结构,并分析与这些蛋白质相关的结构和功能方面,我们在这里提供了第一个已知的马催乳素和催乳素受体模型,这些模型在不同的软件质量评估中获得了很高的整体质量分数。ePrl 的 QMEAN 总分为 (-4.09),ePrlr 的 QMEANbrane 总分为 (-8.45),这证明了这些结构的可靠性。这项研究将在马基因组学中引入另一个工具,以阐明这些分子的相互作用、结构和功能的改变,从而有助于诊断生育问题,为选择具有高遗传力的牛群做出贡献。

相似文献

1
In silico prediction of prolactin molecules as a tool for equine genomics reproduction.基于计算机的催乳素分子预测作为马科动物基因组学繁殖的工具。
Mol Divers. 2019 Nov;23(4):1019-1028. doi: 10.1007/s11030-018-09914-3. Epub 2019 Feb 10.
2
Homology modeling of rabbit prolactin hormone complexed with its receptor.兔催乳素与其受体复合的同源建模。
Proteins. 1997 Mar;27(3):459-68.
3
Structural characterization of the stem-stem dimerization interface between prolactin receptor chains complexed with the natural hormone.催乳素受体链与天然激素复合物中二聚体界面的结构特征。
J Mol Biol. 2010 Nov 19;404(1):112-26. doi: 10.1016/j.jmb.2010.09.036. Epub 2010 Sep 25.
4
The role of prolactin in fish reproduction.催乳素在鱼类生殖中的作用。
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Glycosylated equine prolactin and its carbohydrate moiety.糖基化马催乳素及其碳水化合物部分。
J Protein Chem. 1996 Jul;15(5):413-26. doi: 10.1007/BF01886848.
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The WSXWS motif in cytokine receptors is a molecular switch involved in receptor activation: insight from structures of the prolactin receptor.细胞因子受体中的 WSXWS 基序是参与受体激活的分子开关:来自催乳素受体结构的见解。
Structure. 2012 Feb 8;20(2):270-82. doi: 10.1016/j.str.2011.12.010.
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Gonadotroph-lactotroph associations and expression of prolactin receptors in the equine pituitary gland throughout the seasonal reproductive cycle.马垂体在季节性繁殖周期中促性腺激素细胞与催乳素细胞的关联及催乳素受体的表达
J Reprod Fertil. 2000 Jul;119(2):223-31.
8
Development of homologous radioimmunoassays for equine growth hormone and equine prolactin and their application to the detection of circulating levels of hormone in horse plasma.马生长激素和马催乳素同源放射免疫测定法的开发及其在检测马血浆中激素循环水平的应用。
Reprod Nutr Dev. 1994;34(4):309-28. doi: 10.1051/rnd:19940404.
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Prolactin (PRL) and prolactin receptor (PRLR) genes and their role in poultry production traits.催乳素(PRL)和催乳素受体(PRLR)基因及其在家禽生产性状中的作用。
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Polymorphisms within the prolactin and growth hormone/insulin-like growth factor-1 functional pathways associated with fertility traits in Holstein cows raised in a hot-humid climate.在湿热气候下饲养的荷斯坦奶牛中,催乳素和生长激素/胰岛素样生长因子-1功能途径内与繁殖性状相关的多态性。
Trop Anim Health Prod. 2018 Dec;50(8):1913-1920. doi: 10.1007/s11250-018-1645-0. Epub 2018 Jun 20.

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