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溶剂模型对计算吸收和发射光谱的作用:以萤火虫荧光素为例。

The role of solvation models on the computed absorption and emission spectra: the case of fireflies oxyluciferin.

机构信息

Université Paris-Est, Laboratoire Modélisation et Simulation Multi Échelle, MSME UMR 8208 CNRS, UPEM, 5 bd Descartes, 77454 Marne-la-Vallée, France.

出版信息

Phys Chem Chem Phys. 2019 Feb 20;21(8):4613-4623. doi: 10.1039/c8cp07352j.

Abstract

Surrounding effects are crucial to successfully simulate the absorption and emission spectra of molecular systems. In this work we test different solvation models to compute transition energies and to simulate the spectra of oxyluciferin responsible for the light emission in fireflies and its derivatives. We demonstrate that, within the PCM model, the IBSF formalism is suitable for computing the transition energies of the oxyluciferin chemical forms characterized by a charge transfer character. On the other hand, the LR approach could be used for the chemical forms where an almost negligible charge transfer takes place. Moreover, we demonstrate that explicit solvation models, applied by QM/MM calculations, are needed to accurately reproduce the experimental shape of the spectra. Finally, the vibrationally resolved spectra using a solvation model (implicit or microsolvation) is computed. Some noticeable differences arise when considering the implicit solvation with respect to gas phase vibrational spectra, while small changes were found when explicit water molecules within a microsolvated model are considered.

摘要

环境效应对成功模拟分子体系的吸收和发射光谱至关重要。在这项工作中,我们测试了不同的溶剂化模型来计算跃迁能,并模拟萤火虫发光的氧合荧光素及其衍生物的光谱。我们证明,在 PCM 模型中,IBSF 形式适用于计算具有电荷转移特征的氧合荧光素化学形式的跃迁能。另一方面,LR 方法可用于电荷转移几乎可以忽略不计的化学形式。此外,我们证明需要通过 QM/MM 计算应用显式溶剂化模型来准确重现实验光谱的形状。最后,使用溶剂化模型(显式或微溶剂化)计算了振动分辨光谱。与气相振动光谱相比,考虑到隐式溶剂化时会出现一些明显的差异,而在微溶剂化模型中考虑到显式水分子时则发现了一些小的变化。

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