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与巴西中国树衰退相关的16SrIII-B组植原体的首次报道

First Report of a Group 16SrIII-B Phytoplasma Associated with Decline of China Tree in Brazil.

作者信息

Duarte V, Silva E G, Hass I C R, Bedendo I P, Kitajima E W

机构信息

Departamento de Fitossanidade, Agronomia, UFRGS, CP 15,100, 90,001-970, Porto Alegre, RS, Brazil.

Departamento de Entomologia, Fitopatologia e Zoologia Agrícola, ESALQ/USP, CP9, 13418-900, Piracicaba, SP, Brazil.

出版信息

Plant Dis. 2009 Jun;93(6):666. doi: 10.1094/PDIS-93-6-0666B.

DOI:10.1094/PDIS-93-6-0666B
PMID:30764426
Abstract

China tree (Melia azedarach L.), originally from Asia, is an exotic deciduous species in Brazil and is used as an ornamental shade tree in the southern region of the country. Since 2005, plants displaying yellowing, little leaves, witches' broom, and decline have been observed in the State of Rio Grande do Sul. In the streets and avenues of the capital city of Porto Alegre, there are approximately 173 tree species and China tree (6.57% of all trees) is among the top 10 (80,000 China trees and most are symptomatic). Plants with those symptoms are very distinctive and have been found also in the cities of Livramento, Rio Grande, Santa Maria, and Vacaria, places located in seashore areas, and along highways everywhere in the state. The high incidence seems to be related to drought during the last few years. These symptoms are typical of a disease identified by yellowing or decline of China tree associated with phytoplasma and previously reported in the neighboring countries of Argentina, Paraguay, and Bolivia (2). To demonstrate the presence of phytoplasma in diseased trees and to confirm its identity, total DNA was extracted from China tree leaf midribs collected from 10 symptomatic and three asymptomatic plants. Nested PCR was performed with the P1/P7 primer pair in the primary PCR to amplify a 1.8-kb fragment encompassing the 16S rRNA gene, the 16S-23S spacer region, and the 5' end of the 23S rRNA gene, while the secondary PCR was primed by the R16F2n/R16R2 primer pair to amplify a 1.2-kb fragment of the 16S rRNA gene from the 1.8-kb fragment (3,4). DNA fragments of 1.2 kb amplified from nested PCR were analyzed by restriction fragment length polymorphism with restriction enzymes AluI, HhaI, HpaII, KpnI, MboI, MseI, and RsaI, revealing identical profiles for each amplicon and demonstrating that a phytoplasma belonging to group 16SrIII, subgroup B (16SrIII-B) (1) was associated consistently with all symptomatic plants. BLAST analysis revealed 99% identity among these cloned 1.2-kb sequences and representative sequences of phytoplasmas affiliated with group 16SrIII (GenBank Accession Nos. AY081817 and AF147706). A majority consensus sequence representing the phytoplasma found in China trees was selected and deposited in GenBank (Accession No. FJ404775). These results were confirmed by observation with transmission electron microscopy of pleomorphic bodies 400 to 2,000 nm in diameter in the phloem sieve tubes of all symptomatic trees. No phytoplasma was detected or visualized in asymptomatic samples. These results corroborate those from studies conducted in neighboring countries that demonstrated the association between phytoplasmas of group 16SrIII and decline of China trees (1). In conclusion, the current study revealed that a phytoplasma affiliated with group 16SrIII-B is associated with the decline of China tree in Brazil, a disease previously described based solely on symptoms (2). The incidence and severity of the disease are enough to prevent further use of these trees as landscape plants in southern Brazil. References: (1) J. D. Arneodo et al. J. Phytopathol. 155:70, 2007. (2) M. Dalbosco et al. Fitopatol. Bras. 30(Suppl.):177, 2005. (3) S. Deng and C. Hiruki. J. Microbiol. Methods 14:53, 1991. (4) C. D. Smart et al. Appl. Environ. Microbiol. 62:2988, 1996.

摘要

苦楝(Melia azedarach L.)原产于亚洲,在巴西是外来落叶树种,在该国南部地区用作观赏遮荫树。自2005年以来,在南里奥格兰德州观察到植株出现黄化、小叶、扫帚状丛枝和衰退现象。在阿雷格里港首府的街道和大道上,大约有173种树木,苦楝(占所有树木的6.57%)位列前十(有80000棵苦楝,大多数有症状)。有这些症状的植株非常独特,在利夫拉门托、里奥格兰德、圣玛丽亚和瓦卡里亚等城市也有发现,这些地方位于沿海地区,以及该州各地的高速公路沿线。高发病率似乎与过去几年的干旱有关。这些症状是一种由苦楝黄化或衰退所识别的疾病的典型症状,与植原体有关,此前在邻国阿根廷、巴拉圭和玻利维亚有过报道(2)。为了证明患病树木中存在植原体并确认其身份,从10株有症状和3株无症状植株采集的苦楝叶中脉提取总DNA。在第一次PCR中使用P1/P7引物对进行巢式PCR,以扩增包含16S rRNA基因、16S - 23S间隔区和23S rRNA基因5'端的1.8 kb片段,而第二次PCR由R16F2n/R16R2引物对引发,以从1.8 kb片段扩增16S rRNA基因的1.2 kb片段(3,4)。通过用限制性内切酶AluI、HhaI、HpaII、KpnI、MboI、MseI和RsaI进行限制性片段长度多态性分析,对巢式PCR扩增的1.2 kb DNA片段进行分析,结果显示每个扩增子的图谱相同,表明属于16SrIII组B亚组(16SrIII - B)(1)的植原体与所有有症状植株始终相关。BLAST分析显示,这些克隆的1.2 kb序列与隶属于16SrIII组的植原体代表性序列(GenBank登录号AY081817和AF147706)之间有99%的同一性。选择代表在苦楝中发现的植原体的多数一致序列并保存在GenBank(登录号FJ404775)。通过透射电子显微镜观察,在所有有症状树木的韧皮部筛管中发现直径为400至2000 nm的多形性菌体,无症状样本中未检测到或观察到植原体。这些结果证实了邻国进行的研究结果,这些研究表明16SrIII组植原体与苦楝衰退之间存在关联(1)。总之,目前的研究表明,隶属于16SrIII - B组的植原体与巴西苦楝衰退有关,此前仅根据症状描述过这种疾病(2)。该病的发病率和严重程度足以阻止这些树木在巴西南部作为园林植物的进一步使用。参考文献:(1) J. D. Arneodo等人,《植物病理学杂志》155:70,2007年。(2) M. Dalbosco等人,《巴西植物病理学》3:177增刊,2005年。(3) S. Deng和C. Hiruki,《微生物学方法杂志》14:53,1991年。(4) C. D. Smart等人,《应用与环境微生物学》62:2988,1996年。

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