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耐热棘孢曲霉和构巢曲霉的肽基精氨酸脱亚氨酶类似物的生化特性。

Biochemical characterization of peptidylarginine deiminase-like orthologs from thermotolerant Emericella dentata and Aspergillus nidulans.

机构信息

Enzymology and Fungal Biotechnology Lab (EFBL), Botany and Microbiology Department, Faculty of Science, Zagazig University, Zagazig, 44519, Egypt.

Enzymology and Fungal Biotechnology Lab (EFBL), Botany and Microbiology Department, Faculty of Science, Zagazig University, Zagazig, 44519, Egypt.

出版信息

Enzyme Microb Technol. 2019 May;124:41-53. doi: 10.1016/j.enzmictec.2019.02.004. Epub 2019 Feb 7.

Abstract

Peptidylarginine deiminases (PADs) are a group of hydrolases, mediating the deimination of peptidylarginine residues into peptidyl-citrulline. Equivocal protein citrullination by PADs of fungal pathogens has a strong relation to the progression of multiple human diseases, however, the biochemical properties of fungal PADs remain ambiguous. Thus, this is the first report exploring the molecular properties of PAD from thermotolerant fungi, to imitate the human temperature. The teleomorph Emericella dentata and anamorph Aspergillus nidulans have been morphologically and molecularly identified, with observed robust growth at 37-40 °C, and strong PAD productivity. The physiological profiles of E. dentata and A. nidulans for PADs production in response to carbon, nitrogen sources, initial medium pH and incubation temperature were relatively identical, emphasizing the taxonomical proximity of these fungal isolates. PADs were purified from E. dentata and A. nidulans with apparent molecular masses 41 and 48 kDa, respectively. The peptide fingerprints of PADs from E. dentata and A. nidulans have been analyzed by MALDI-TOF/MS, displaying a higher sequence similarity to human PAD4 by 18% and 31%, respectively. The conserved peptide sequences of E. dentata and A. nidulans PADs displayed a higher similarity to human PAD than A. fumigatus PADs clade. PADs from both fungal isolates have an optimum pH and pH stability at 7.0-8.0, with putative pI 5.0-5.5, higher structural denaturation at pH 4.0-5.5 and 9.5-12 as revealed from absorbance at λnm. E. dentata PAD had a higher conformationally thermal stability than A. nidulans PAD as revealed from its lower K value. From the proteolytic mapping, the orientation of trypsinolytic recognition sites on the PADs surface from both fungal isolates was very similar. PADs from both isolates are calcium dependent, with participation of serine and cysteine residues on their catalytic sites. PADs displayed a higher affinity to deiminate the peptidylarginine residues with a feeble affinity to work as ADI. So, PADs from E. dentata and A. nidulans had a relatively similar conformational and kinetic properties. Further molecular modeling analysis are ongoing to explore the role of PADs in citrullination of human proteins in Aspergillosis, that will open a new avenue for unraveling the vague of protein-protein interaction of human A. nidulans pathogen.

摘要

肽基精氨酸脱亚氨酶(PADs)是一组水解酶,介导肽基精氨酸残基的脱亚氨基化为肽基瓜氨酸。真菌病原体的蛋白质等效瓜氨酸化与多种人类疾病的进展密切相关,然而,真菌 PAD 的生化特性仍不清楚。因此,这是首次报道探索耐热真菌 PAD 的分子特性,以模拟人体温度。有性型棘孢曲霉和无性型构巢曲霉在形态和分子上已被鉴定,在 37-40°C 下表现出强劲的生长,并有很强的 PAD 生产力。棘孢曲霉和构巢曲霉的生理特征表明,它们在响应碳、氮源、初始培养基 pH 和培养温度时,产生 PAD 的能力相似,这强调了这些真菌分离物在分类学上的亲缘关系。从棘孢曲霉和构巢曲霉中纯化出的 PAD 具有明显的 41 和 48kDa 分子量。通过 MALDI-TOF/MS 分析了棘孢曲霉和构巢曲霉 PAD 的肽指纹图谱,结果表明,它们与人类 PAD4 的序列相似性分别为 18%和 31%。棘孢曲霉和构巢曲霉 PAD 的保守肽序列与人类 PAD 的相似性高于烟曲霉 PAD 簇。来自两种真菌分离物的 PAD 在 pH7.0-8.0 时具有最佳 pH 值和 pH 稳定性,假定 pI 为 5.0-5.5,在 pH4.0-5.5 和 9.5-12 时具有更高的结构变性,这是从 λnm 处的吸光度揭示的。棘孢曲霉 PAD 的构象热稳定性高于构巢曲霉 PAD,这反映在其较低的 K 值上。从蛋白水解图谱来看,两种真菌分离物 PAD 表面的胰蛋白酶识别位点的取向非常相似。两种分离物的 PAD 均依赖于钙,其催化位点上有丝氨酸和半胱氨酸残基参与。PAD 对脱亚氨基化肽基精氨酸残基具有较高的亲和力,对 ADI 的亲和力较弱。因此,棘孢曲霉和构巢曲霉的 PAD 具有相对相似的构象和动力学特性。目前正在进行进一步的分子建模分析,以探索 PAD 在烟曲霉病中瓜氨酸化人类蛋白的作用,这将为解开人类烟曲霉病原体中蛋白质-蛋白质相互作用的谜团开辟新途径。

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