Kanjo Kawkab, Surin Sandeep Inigo, Gupta Tusharika, Dhanasingh M, Singh Balwant, Saini Gurvinder Kaur
Fungal Biotechnology Lab, Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam 781039 India.
3 Biotech. 2019 Mar;9(3):75. doi: 10.1007/s13205-019-1610-2. Epub 2019 Feb 11.
In this study, collagen -like protein (MCL1) promoter from was analysed and truncated into different sizes through series of targeted and random deletions based on the presence of various transcription factor-binding sites. Synthetic Green Fluorescent Protein (sGFP) was being utilized as a reporter gene to study the relative expression driving capability of unmodified and truncated promoters. Conserved promoter sequence analysis revealed similarity between the paralogous promoters from and . sGFP expression in the haemolymph was directed with the help of signal peptide sequence. Deleting the promoter region from - 2764 to - 1583 bp increases the promoter (P) activity by twofolds, while deletions of the regions upstream of - 1150 bp and - 840 bp caused a decrease of sGFP expression level (80% and 70%, respectively). Transcriptional binding sites predicted for the deleted region revealed the loss of upstream repressing sequences such as Matalpha2 along with ROX1 and Rap1 repressor-binding sites located - 2234 bp, - 1754 bp and - 1724 bp from the TSS. Compared with Pwild type (2.7 kbp), P-1583 bp had a shorter sequence and showed statistically significant expression in . This study introduces a highly efficient strong inducible promoter for over-expression of target genes in .
在本研究中,对来自[具体来源]的类胶原蛋白(MCL1)启动子进行了分析,并基于各种转录因子结合位点的存在,通过一系列靶向和随机缺失将其截短为不同大小。合成绿色荧光蛋白(sGFP)被用作报告基因,以研究未修饰和截短启动子的相对表达驱动能力。保守启动子序列分析揭示了来自[具体来源]的同源启动子之间的相似性。血淋巴中的sGFP表达借助[具体信号肽序列名称]信号肽序列来引导。从 - 2764至 - 1583 bp删除启动子区域可使启动子(P)活性提高两倍,而删除 - 1150 bp和 - 840 bp上游区域会导致sGFP表达水平降低(分别为80%和70%)。对缺失区域预测的转录结合位点显示,上游抑制序列如Matalpha2以及位于距转录起始位点(TSS) - 2234 bp、 - 1754 bp和 - 1724 bp处的ROX1和Rap1抑制因子结合位点缺失。与野生型启动子P(2.7 kbp)相比,P - 1583 bp序列较短,且在[具体物种或细胞类型]中显示出统计学上的显著表达。本研究为[具体物种或细胞类型]中靶基因的过表达引入了一种高效的强诱导型启动子。