Department of Pediatrics, Women's Hospital of Nanjing Medical University, Nanjing Maternity and Child Health Care Hospital, Nanjing, Jiangsu, China.
Department of Pediatrics, The First People's Hospital of Lianyungang City, Lianyungang, Jiangsu, China.
J Cell Biochem. 2019 Jun;120(6):9369-9380. doi: 10.1002/jcb.28212. Epub 2019 Feb 25.
New perinatal care technologies have improved the survival rate of preterm neonates, but the prevalence of bronchopulmonary dysplasia (BPD), one of the most intractable problems in neonatal intensive care unit (NICU), remains unchanged. In present study, high-throughput sequencing (HTS) was performed to detect the expression profiles of long noncoding RNAs (lncRNAs), messenger RNAs (mRNAs), circular RNAs (circRNAs), and microRNAs (miRNAs) in hyperoxia-induced BPD mouse model. Significant differentially expressed RNAs were selected and clustered between the BPD group and the control group. The results revealed that expressions of 1778 lncRNAs, 1240 mRNAs, 97 circRNAs, and 201 miRNAs were significantly altered in the BPD group. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were performed to predict the potential functions of differentially expressed RNAs. lncRNA-mRNA and circRNA-miRNA coexpression networks were constructed to detect their association with the pathogenesis of BPD. Our study provides a systematic perspective on the potential function of RNAs during BPD.
新的围产儿护理技术提高了早产儿的存活率,但新生儿重症监护病房(NICU)中最棘手的问题之一——支气管肺发育不良(BPD)的患病率仍未改变。在本研究中,采用高通量测序(HTS)技术检测高氧诱导的 BPD 小鼠模型中长链非编码 RNA(lncRNA)、信使 RNA(mRNA)、环状 RNA(circRNA)和 microRNA(miRNA)的表达谱。在 BPD 组和对照组之间选择并聚类了差异表达的 RNA。结果表明,BPD 组中 1778 个 lncRNA、1240 个 mRNA、97 个 circRNA 和 201 个 miRNA 的表达显著改变。进行了基因本体论(GO)和京都基因与基因组百科全书(KEGG)分析,以预测差异表达 RNA 的潜在功能。构建了 lncRNA-mRNA 和 circRNA-miRNA 共表达网络,以检测它们与 BPD 发病机制的关联。本研究为 BPD 期间 RNA 的潜在功能提供了系统的视角。