Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.
Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.
ISME J. 2019 Jun;13(6):1602-1617. doi: 10.1038/s41396-019-0356-5. Epub 2019 Feb 26.
How the diversity of organisms competing for or sharing resources influences community function is an important question in ecology but has rarely been explored in natural microbial communities. These generally contain large numbers of species making it difficult to disentangle how the effects of different interactions scale with diversity. Here, we show that changing diversity affects measures of community function in relatively simple communities but that increasing richness beyond a threshold has little detectable effect. We generated self-assembled communities with a wide range of diversity by growth of cells from serially diluted seawater on brown algal leachate. We subsequently isolated the most abundant taxa from these communities via dilution-to-extinction in order to compare productivity functions of the entire community to those of individual taxa. To parse the effect of different types of organismal interactions, we defined relative total function (RTF) as an index for positive or negative effects of diversity on community function. Our analysis identified three overall regimes with increasing diversity. At low richness (<12 taxa), positive and negative effects of interactions were both weak, while at moderate richness (12-26 taxa), community resource uptake increased but the carbon use efficiency decreased. Finally, beyond 26 taxa, the effect of interactions on community function saturated and further diversity increases did not affect community function. Although more diverse communities had overall greater access to resources, on average individual taxa within these communities had lower resource availability and reduced carbon use efficiency. Our results thus suggest competition and complementation simultaneously increase with diversity but both saturate at a threshold.
生物之间竞争或共享资源的多样性如何影响群落功能是生态学中的一个重要问题,但在自然微生物群落中却很少被探索。这些群落通常包含大量的物种,使得很难理清不同相互作用的影响如何随多样性而变化。在这里,我们表明,改变多样性会影响相对简单群落中群落功能的衡量标准,但在超过阈值后增加丰富度几乎没有可检测到的影响。我们通过在褐藻浸出物上从连续稀释的海水中生长细胞来生成具有广泛多样性的自组装群落。随后,我们通过稀释至灭绝从这些群落中分离出最丰富的类群,以便将整个群落的生产力函数与单个类群的生产力函数进行比较。为了解析不同类型的生物相互作用的影响,我们将相对总功能(RTF)定义为多样性对群落功能的正或负影响的指标。我们的分析确定了随着多样性增加的三个总体模式。在低丰富度(<12 个分类群)下,相互作用的正效应和负效应都很弱,而在中等丰富度(12-26 个分类群)下,群落资源吸收增加,但碳利用效率降低。最后,超过 26 个分类群后,相互作用对群落功能的影响饱和,进一步增加多样性不会影响群落功能。尽管更多样化的群落总体上有更多的资源可利用,但这些群落中的平均单个类群的资源可用性较低,碳利用效率降低。因此,我们的结果表明,竞争和互补性随着多样性的增加而同时增加,但都在一个阈值处饱和。