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中国人群中基因的多态性。

The Polymorphism of Gene in Chinese Dividuals.

作者信息

Yu Ying, Wang Zhejiong, Zhu Linchao, Lin Yushiang, Chang Haochun, Xu Huaxi

机构信息

1Institute of Laboratory Medicine, Jiangsu Key Laboratory of Medicine, Jiangsu University, Zhenjiang, China.

Department of Laboratory Medicine, Chinese Medicine Hospital of Zhejiang, Hangzhou, China.

出版信息

Indian J Hematol Blood Transfus. 2019 Jan;35(1):137-143. doi: 10.1007/s12288-018-0963-8. Epub 2018 Jun 21.

DOI:10.1007/s12288-018-0963-8
PMID:30828161
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6369081/
Abstract

The gene, which encodes the high-frequency blood group antigen Vel, has not been systematically analyzed at the molecular level in Chinese individuals. To better understand the SMIM1 genetic polymorphism, we assessed mutations among healthy Chinese individuals, patients with red blood cell autoantibodies and hematological disease. A total of 130 patients with hematological disease (case I group), 50 patients with red blood cell autoantibodies (case II group), and 500 healthy controls (control group) were enrolled. Exons 3 and 4 in the gene were sequenced to identify genetic variants or mutations. A polyclonal anti-Vel antibody was used to evaluate the expression of the Vel antigenon red blood cells in patients with novel alleles. The novel alleles of the SMIM1 gene were intron 3 position 193 (TT, CT, CC), 194 (GG, AG), 3' untranslated region positions 81 (CC, CA) and 87 (AA, CA). The single nucleotide polymorphism (SNP) frequencies of intron 3 position 193 TT, CT, CC were 13.1, 39.2, 47.7% in case group I, 6.7, 33.3, 60.0% in case group II and 8.5, 35.6, 56.2% in the control group, respectively. Other minor allele frequencies were all greater than 10% and all SNPs in Chinese showed Vel antigen expression on RBC membranes. The allele at intron 3 position 193 was the most frequent mutant allele found in the Chinese population and Vel antigen deficiency may not cause problems in Chinese patients with hematological diseases and RBC autoantibodies.

摘要

编码高频血型抗原Vel的基因,尚未在中国人群中进行系统的分子水平分析。为了更好地了解SMIM1基因多态性,我们评估了健康中国人群、红细胞自身抗体患者和血液系统疾病患者中的突变情况。共纳入130例血液系统疾病患者(病例I组)、50例红细胞自身抗体患者(病例II组)和500名健康对照者(对照组)。对该基因的外显子3和4进行测序以鉴定基因变异或突变。使用多克隆抗Vel抗体评估新等位基因患者红细胞上Vel抗原的表达。SMIM1基因的新等位基因有内含子3位置193(TT、CT、CC)、194(GG、AG)、3'非翻译区位置81(CC、CA)和87(AA、CA)。内含子3位置193的TT、CT、CC单核苷酸多态性(SNP)频率在病例I组中分别为13.1%、39.2%、47.7%,在病例II组中分别为6.7%、33.3%、60.0%,在对照组中分别为8.5%、35.6%、56.2%。其他次要等位基因频率均大于10%,且中国人群中的所有SNP均显示红细胞膜上有Vel抗原表达。内含子3位置193的等位基因是中国人群中最常见的突变等位基因,Vel抗原缺乏可能不会给中国血液系统疾病患者和红细胞自身抗体患者带来问题。

相似文献

1
The Polymorphism of Gene in Chinese Dividuals.中国人群中基因的多态性。
Indian J Hematol Blood Transfus. 2019 Jan;35(1):137-143. doi: 10.1007/s12288-018-0963-8. Epub 2018 Jun 21.
2
SMIM1 polymorphisms in a donor population from southeast Brazil and their correlation with VEL expression.巴西东南部供体人群中的 SMIM1 多态性及其与 VEL 表达的相关性。
Blood Transfus. 2019 Jan;17(1):60-65. doi: 10.2450/2018.0192-17. Epub 2018 Jan 11.
3
[Molecular screening for Vel- blood type and analysis of SMIM1 gene variants].[Vel血型的分子筛查及SMIM1基因变异分析]
Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2020 Dec 10;37(12):1349-1351. doi: 10.3760/cma.j.cn511374-20191216-00640.
4
Impact of genetic variation in the SMIM1 gene on Vel expression levels.SMIM1基因的遗传变异对Vel表达水平的影响。
Transfusion. 2015 Jun;55(6 Pt 2):1457-66. doi: 10.1111/trf.13014. Epub 2015 Feb 3.
5
SMIM1 intron 2 gene variations leading to variability in Vel antigen expression among Brazilian blood donors.SMIM1 内含子 2 基因变异导致巴西献血者间 Vel 抗原表达的变异性。
Blood Cells Mol Dis. 2019 Jul;77:23-28. doi: 10.1016/j.bcmd.2019.03.006. Epub 2019 Mar 25.
6
SMIM1 variants rs1175550 and rs143702418 independently modulate Vel blood group antigen expression.SMIM1 变体 rs1175550 和 rs143702418 可独立调节 Vel 血型抗原的表达。
Sci Rep. 2017 Jan 13;7:40451. doi: 10.1038/srep40451.
7
SMIM1 underlies the Vel blood group and influences red blood cell traits.SMIM1 是 Vel 血型的基础,并影响红细胞特性。
Nat Genet. 2013 May;45(5):542-545. doi: 10.1038/ng.2603. Epub 2013 Apr 7.
8
Homozygosity for a null allele of SMIM1 defines the Vel-negative blood group phenotype.SMIM1 无效等位基因的纯合性定义了 Vel-阴性血型表型。
Nat Genet. 2013 May;45(5):537-41. doi: 10.1038/ng.2600. Epub 2013 Apr 7.
9
The c.64_80del SMIM1 allele is segregating in the Hutterite population.c.64_80del SMIM1等位基因在哈特派人群中呈分离状态。
Transfusion. 2016 Apr;56(4):946-9. doi: 10.1111/trf.13439. Epub 2015 Dec 15.
10
Molecular Screening for Vel- Blood Donors in Southwestern Germany.德国西南部Vel血型献血者的分子筛查
Transfus Med Hemother. 2015 Nov;42(6):356-60. doi: 10.1159/000440791. Epub 2015 Nov 3.

本文引用的文献

1
High-throughput strategy for molecular identification of Vel- blood donors employing nucleic acids extracted from plasma pools used for viral nucleic acid test screening.采用从用于病毒核酸检测筛查的血浆库中提取的核酸对Vel血型阴性献血者进行分子鉴定的高通量策略。
Transfusion. 2016 Jun;56(6):1430-4. doi: 10.1111/trf.13572. Epub 2016 Apr 5.
2
The c.64_80del SMIM1 allele is segregating in the Hutterite population.c.64_80del SMIM1等位基因在哈特派人群中呈分离状态。
Transfusion. 2016 Apr;56(4):946-9. doi: 10.1111/trf.13439. Epub 2015 Dec 15.
3
A multicenter study on the performance of a fully automated, walk-away high-throughput analyzer for pretransfusion testing in the US population.一项关于全自动、无需值守的高通量分析仪在美国人群输血前检测性能的多中心研究。
Transfusion. 2015 Jun;55(6 Pt 2):1522-8. doi: 10.1111/trf.13053. Epub 2015 Mar 9.
4
Homozygosity for a null allele of SMIM1 defines the Vel-negative blood group phenotype.SMIM1 无效等位基因的纯合性定义了 Vel-阴性血型表型。
Nat Genet. 2013 May;45(5):537-41. doi: 10.1038/ng.2600. Epub 2013 Apr 7.
5
Disruption of SMIM1 causes the Vel- blood type.SMIM1 缺失导致 Vel- 血型。
EMBO Mol Med. 2013 May;5(5):751-61. doi: 10.1002/emmm.201302466. Epub 2013 Apr 15.
6
Misidentification of anti-Vel due to inappropriate use of prewarming and adsorption techniques.由于不恰当地使用预热和吸附技术导致抗-Vel血型抗体的误鉴定。
Immunohematology. 1994;10(3):83-6.
7
Second example of the antibody for the high-incidence blood factor Vel.针对高发生率血型因子Vel的抗体的第二个实例。
Am J Clin Pathol. 1955 Jul;25(7):751-4. doi: 10.1093/ajcp/25.7.751.
8
Current status of the Vel blood group system.Vel血型系统的当前状况。
Transfusion. 1962 May-Jun;2:163-71. doi: 10.1111/j.1537-2995.1962.tb00216.x.
9
Another example of anti-Vel.抗维勒(Vel)的另一个例子。
Am J Clin Pathol. 1959 Feb;31(2):104-6. doi: 10.1093/ajcp/31.2.104.
10
Unsatisfactory detection of an in vivo haemolytic anti-vel by the gel test.凝胶试验对体内溶血型抗-Vel的检测结果不理想。
Vox Sang. 1998;75(1):70-1.