• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Significantly different effects of tetrahydroberberrubine enantiomers on dopamine D1/D2 receptors revealed by experimental study and integrated in silico simulation.实验研究与整合计算模拟揭示四氢小檗红碱对多巴胺 D1/D2 受体的显著不同作用。
J Comput Aided Mol Des. 2019 Apr;33(4):447-459. doi: 10.1007/s10822-019-00194-z. Epub 2019 Mar 6.
2
Chemical synthesis, microbial transformation and biological evaluation of tetrahydroprotoberberines as dopamine D1/D2 receptor ligands.四氢原小檗碱作为多巴胺 D1/D2 受体配体的化学合成、微生物转化及生物评价。
Bioorg Med Chem. 2019 May 15;27(10):2100-2111. doi: 10.1016/j.bmc.2019.04.014. Epub 2019 Apr 8.
3
Dopamine D1 receptor agonist and D2 receptor antagonist effects of the natural product (-)-stepholidine: molecular modeling and dynamics simulations.天然产物(-)-千金藤啶碱的多巴胺D1受体激动剂和D2受体拮抗剂作用:分子建模与动力学模拟
Biophys J. 2007 Sep 1;93(5):1431-41. doi: 10.1529/biophysj.106.088500. Epub 2007 Apr 27.
4
Levo-Tetrahydroberberrubine Produces Anxiolytic-Like Effects in Mice through the 5-HT1A Receptor.左旋四氢小檗红碱通过5-HT1A受体在小鼠中产生抗焦虑样作用。
PLoS One. 2017 Jan 13;12(1):e0168964. doi: 10.1371/journal.pone.0168964. eCollection 2017.
5
Synthesis and evaluation of C9 alkoxy analogues of (-)-stepholidine as dopamine receptor ligands.(-)-千金藤啶碱的C9烷氧基类似物作为多巴胺受体配体的合成与评价
Eur J Med Chem. 2017 Jan 5;125:255-268. doi: 10.1016/j.ejmech.2016.09.036. Epub 2016 Sep 14.
6
Functional reversal of (-)-Stepholidine analogues by replacement of benzazepine substructure using the ring-expansion strategy.通过环扩展策略取代苯并氮杂卓亚结构实现(-)-千金藤啶碱类似物的功能逆转。
Chem Biol Drug Des. 2016 Oct;88(4):599-607. doi: 10.1111/cbdd.12796. Epub 2016 Jun 24.
7
Effects of tetrahydroprotoberberines on dopamine receptor subtypes in brain.四氢原小檗碱对脑内多巴胺受体亚型的影响。
Zhongguo Yao Li Xue Bao. 1989 Mar;10(2):104-10.
8
2,3,9- and 2,3,11-trisubstituted tetrahydroprotoberberines as D2 dopaminergic ligands.2,3,9- 和 2,3,11-三取代的四氢异喹啉类作为 D2 多巴胺能配体。
Eur J Med Chem. 2013 Oct;68:150-66. doi: 10.1016/j.ejmech.2013.07.036. Epub 2013 Aug 11.
9
Discovery of eight alkaloids with D1 and D2 antagonist activity in leaves of Nelumbo nucifera Gaertn. Using FLIPR assays.在荷叶中发现了八种具有 D1 和 D2 拮抗剂活性的生物碱。使用 FLIPR assays 进行测定。
J Ethnopharmacol. 2021 Oct 5;278:114335. doi: 10.1016/j.jep.2021.114335. Epub 2021 Jun 15.
10
Asymmetric total synthesis and identification of tetrahydroprotoberberine derivatives as new antipsychotic agents possessing a dopamine D(1), D(2) and serotonin 5-HT(1A) multi-action profile.不对称全合成及鉴定四氢原小檗碱衍生物作为新型抗精神病药物,具有多巴胺 D(1)、D(2)和 5-羟色胺 5-HT(1A)多作用特性。
Bioorg Med Chem. 2013 Feb 15;21(4):856-68. doi: 10.1016/j.bmc.2012.12.016. Epub 2012 Dec 21.

引用本文的文献

1
The release of host-derived antibodies bound to the variant surface glycoprotein (VSG) of cannot be explained by pH-dependent conformational changes of the VSG dimer.与锥虫可变表面糖蛋白(VSG)结合的宿主衍生抗体的释放不能用VSG二聚体的pH依赖性构象变化来解释。
Open Res Eur. 2024 Apr 24;4:87. doi: 10.12688/openreseurope.16783.1. eCollection 2024.
2
Methyleugenol Has an Antidepressant Effect in a Neuroendocrine Model: In Silico and In Vivo Evidence.甲基丁香酚在神经内分泌模型中具有抗抑郁作用:计算机模拟和体内实验证据
Pharmaceuticals (Basel). 2023 Oct 4;16(10):1408. doi: 10.3390/ph16101408.
3
Computational insights into ligand-induced G protein and β-arrestin signaling of the dopamine D1 receptor.计算洞察激动剂诱导的多巴胺 D1 受体与 G 蛋白和β-arrestin 的信号转导。
J Comput Aided Mol Des. 2023 Jun;37(5-6):227-244. doi: 10.1007/s10822-023-00503-7. Epub 2023 Apr 15.
4
Effect of Berberine Hydrochloride on the Diversity of Intestinal Flora in Parkinson's Disease Patients.盐酸小檗碱对帕金森病患者肠道菌群多样性的影响。
Contrast Media Mol Imaging. 2022 May 30;2022:8381870. doi: 10.1155/2022/8381870. eCollection 2022.
5
Generative chemistry: drug discovery with deep learning generative models.生成化学:用深度学习生成模型进行药物发现。
J Mol Model. 2021 Feb 4;27(3):71. doi: 10.1007/s00894-021-04674-8.

本文引用的文献

1
Development and Testing of Druglike Screening Libraries.药物筛选库的开发与测试。
J Chem Inf Model. 2019 Jan 28;59(1):53-65. doi: 10.1021/acs.jcim.8b00537. Epub 2019 Jan 3.
2
Computational systems pharmacology analysis of cannabidiol: a combination of chemogenomics-knowledgebase network analysis and integrated in silico modeling and simulation.计算系统药理学分析大麻二酚:基于化学生物基因组学知识库网络分析及整合的计算模拟。
Acta Pharmacol Sin. 2019 Mar;40(3):374-386. doi: 10.1038/s41401-018-0071-1. Epub 2018 Sep 10.
3
Structure of the D2 dopamine receptor bound to the atypical antipsychotic drug risperidone.D2 多巴胺受体与非典型抗精神病药物利培酮结合的结构。
Nature. 2018 Mar 8;555(7695):269-273. doi: 10.1038/nature25758. Epub 2018 Jan 24.
4
Trends in GPCR drug discovery: new agents, targets and indications.G蛋白偶联受体(GPCR)药物研发趋势:新药物、靶点与适应症
Nat Rev Drug Discov. 2017 Dec;16(12):829-842. doi: 10.1038/nrd.2017.178. Epub 2017 Oct 27.
5
Crystal structures of agonist-bound human cannabinoid receptor CB.激动剂结合的人源大麻素受体CB的晶体结构
Nature. 2017 Jul 27;547(7664):468-471. doi: 10.1038/nature23272. Epub 2017 Jul 5.
6
Integrated In Silico Fragment-Based Drug Design: Case Study with Allosteric Modulators on Metabotropic Glutamate Receptor 5.基于片段的计算机整合药物设计:代谢型谷氨酸受体 5 的变构调节剂案例研究。
AAPS J. 2017 Jul;19(4):1235-1248. doi: 10.1208/s12248-017-0093-5. Epub 2017 May 30.
7
Levo-Tetrahydroberberrubine Produces Anxiolytic-Like Effects in Mice through the 5-HT1A Receptor.左旋四氢小檗红碱通过5-HT1A受体在小鼠中产生抗焦虑样作用。
PLoS One. 2017 Jan 13;12(1):e0168964. doi: 10.1371/journal.pone.0168964. eCollection 2017.
8
UniProt: the universal protein knowledgebase.通用蛋白质知识库:UniProt
Nucleic Acids Res. 2017 Jan 4;45(D1):D158-D169. doi: 10.1093/nar/gkw1099. Epub 2016 Nov 29.
9
Tetrahydroberberrubine attenuates lipopolysaccharide-induced acute lung injury by down-regulating MAPK, AKT, and NF-κB signaling pathways.四氢小檗红碱通过下调 MAPK、AKT 和 NF-κB 信号通路减轻脂多糖诱导的急性肺损伤。
Biomed Pharmacother. 2016 Aug;82:489-97. doi: 10.1016/j.biopha.2016.05.025. Epub 2016 Jun 2.
10
Nandinine, a Derivative of Berberine, Inhibits Inflammation and Reduces Insulin Resistance in Adipocytes via Regulation of AMP-Kinase Activity.小檗碱衍生物南天宁通过调节AMP激酶活性抑制脂肪细胞炎症并降低胰岛素抵抗。
Planta Med. 2017 Feb;83(3-04):203-209. doi: 10.1055/s-0042-110576. Epub 2016 Jul 27.

实验研究与整合计算模拟揭示四氢小檗红碱对多巴胺 D1/D2 受体的显著不同作用。

Significantly different effects of tetrahydroberberrubine enantiomers on dopamine D1/D2 receptors revealed by experimental study and integrated in silico simulation.

机构信息

School of Life Sciences, Huzhou University, Huzhou, 313000, China.

Department of Pharmaceutical Sciences and Computational Chemical Genomics Screening Center, School of Pharmacy, University of Pittsburgh, Pittsburgh, PA, 15261, USA.

出版信息

J Comput Aided Mol Des. 2019 Apr;33(4):447-459. doi: 10.1007/s10822-019-00194-z. Epub 2019 Mar 6.

DOI:10.1007/s10822-019-00194-z
PMID:30840169
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6768063/
Abstract

Tetrahydroberberrubine (TU), an active tetrahydroprotoberberines (THPBs), is gaining increasing popularity as a potential candidate for treatment of anxiety and depression. One of its two enantiomers, l-TU, has been reported to be an antagonist of both D1 and D2 receptors, but the functional activity of the other enantiomer, d-TU, is still unknown. In this study, experiments were combined with in silico molecular simulations to (1) confirm and discover the functional activities of l-TU and d-TU, and (2) systematically evaluate the molecular mechanisms beyond the experimental observations. l-TU proved to be an antagonist of both D1 and D2 receptors (IC = 385 nM and 985 nM, respectively), while d-TU shows no affinity against either D1 or D2 receptor, based on the cAMP assay (D1 receptor) and calcium flux assay (D2 receptor). Results from both flexible-ligand docking studies and molecular dynamic (MD) simulations provided insights at the atomic level. The l-TU-bound structures predicted by MD (1) undergo an outward rotation of the extracellular helical bundles; (2) have an enlarged orthosteric binding pocket; and (3) have a central toggle switch that is prevented from rotating freely. These features are unique to the l-TU enantiomer and provide an explanation for its antagonistic behavior toward both D1 and D2 receptors. The present study provides new sight on the structural and functional relationships of l-TU and d-TU binding to dopamine receptors, and provides guidance to the rational design of novel molecules targeting these two dopamine receptors in the future.

摘要

四氢小檗红碱(TU)是一种具有生物活性的四氢原小檗碱(THPBs),作为治疗焦虑和抑郁的潜在候选药物,正受到越来越多的关注。其两种对映异构体之一,l-TU,已被报道为 D1 和 D2 受体的拮抗剂,但另一种对映异构体,d-TU 的功能活性仍不清楚。在这项研究中,实验与计算机分子模拟相结合,(1)证实并发现了 l-TU 和 d-TU 的功能活性,(2)系统地评估了实验观察之外的分子机制。基于 cAMP 测定法(D1 受体)和钙通量测定法(D2 受体),l-TU 被证明是 D1 和 D2 受体的拮抗剂(IC50 分别为 385 nM 和 985 nM),而 d-TU 对 D1 或 D2 受体均无亲和力。灵活配体对接研究和分子动力学(MD)模拟的结果提供了原子水平的见解。MD 预测的 l-TU 结合结构(1)经历了细胞外螺旋束的向外旋转;(2)具有扩大的正位结合口袋;(3)具有中央切换开关,阻止其自由旋转。这些特征是 l-TU 对映异构体所特有的,为其对 D1 和 D2 受体的拮抗作用提供了解释。本研究为 l-TU 和 d-TU 与多巴胺受体结合的结构和功能关系提供了新的视角,并为未来针对这两种多巴胺受体设计新型分子提供了指导。