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非人类灵长类动物全身 4 Gy 辐射暴露后的基于液相色谱-质谱联用的代谢组学研究:整体效应和靶向面板。

Liquid Chromatography-Mass Spectrometry-Based Metabolomics of Nonhuman Primates after 4 Gy Total Body Radiation Exposure: Global Effects and Targeted Panels.

机构信息

Department of Oncology, Lombardi Comprehensive Cancer Center , Georgetown University Medical Center , Washington, D.C. 20007 , United States.

Department of Biochemistry and Molecular & Cellular Biology , Georgetown University Medical Center , Washington, D.C. 20007 , United States.

出版信息

J Proteome Res. 2019 May 3;18(5):2260-2269. doi: 10.1021/acs.jproteome.9b00101. Epub 2019 Mar 18.

Abstract

Rapid assessment of radiation signatures in noninvasive biofluids may aid in assigning proper medical treatments for acute radiation syndrome (ARS) and delegating limited resources after a nuclear disaster. Metabolomic platforms allow for rapid screening of biofluid signatures and show promise in differentiating radiation quality and time postexposure. Here, we use global metabolomics to differentiate temporal effects (1-60 d) found in nonhuman primate (NHP) urine and serum small molecule signatures after a 4 Gy total body irradiation. Random Forests analysis differentially classifies biofluid signatures according to days post 4 Gy exposure. Eight compounds involved in protein metabolism, fatty acid β oxidation, DNA base deamination, and general energy metabolism were identified in each urine and serum sample and validated through tandem MS. The greatest perturbations were seen at 1 d in urine and 1-21 d in serum. Furthermore, we developed a targeted liquid chromatography tandem mass spectrometry (LC-MS/MS) with multiple reaction monitoring (MRM) method to quantify a six compound panel (hypoxanthine, carnitine, acetylcarnitine, proline, taurine, and citrulline) identified in a previous training cohort at 7 d after a 4 Gy exposure. The highest sensitivity and specificity for classifying exposure at 7 d after a 4 Gy exposure included carnitine and acetylcarnitine in urine and taurine, carnitine, and hypoxanthine in serum. Receiver operator characteristic (ROC) curve analysis using combined compounds show excellent sensitivity and specificity in urine (area under the curve [AUC] = 0.99) and serum (AUC = 0.95). These results highlight the utility of MS platforms to differentiate time postexposure and acquire reliable quantitative biomarker panels for classifying exposed individuals.

摘要

快速评估无创生物流体中的辐射特征可能有助于为急性辐射综合征 (ARS) 分配适当的治疗方法,并在核灾难后分配有限的资源。代谢组学平台允许快速筛选生物流体特征,并在区分辐射质量和暴露后时间方面显示出前景。在这里,我们使用全局代谢组学来区分非人类灵长类动物 (NHP) 尿液和血清中小分子特征在全身照射 4 Gy 后的时间效应(1-60 天)。随机森林分析根据 4 Gy 暴露后的天数差异分类生物流体特征。在每个尿液和血清样本中鉴定出涉及蛋白质代谢、脂肪酸β氧化、DNA 碱基脱氨和一般能量代谢的 8 种化合物,并通过串联 MS 进行验证。在尿液中,1 天和血清中 1-21 天观察到最大的干扰。此外,我们开发了一种靶向液相色谱串联质谱 (LC-MS/MS) 与多重反应监测 (MRM) 方法,以定量在以前的训练队列中在 4 Gy 暴露后 7 天鉴定出的六种化合物(次黄嘌呤、肉碱、乙酰肉碱、脯氨酸、牛磺酸和瓜氨酸)。在 4 Gy 暴露后 7 天进行分类的最高灵敏度和特异性包括尿液中的肉碱和乙酰肉碱以及血清中的牛磺酸、肉碱和次黄嘌呤。使用组合化合物的接收器操作特性 (ROC) 曲线分析显示尿液(曲线下面积 [AUC] = 0.99)和血清(AUC = 0.95)的灵敏度和特异性非常好。这些结果突出了 MS 平台在区分暴露后时间和获取可靠的定量生物标志物方面的效用,以对暴露个体进行分类。

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