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有性繁殖植物 RADIALIS 和 DIVARICATA 基因谱系的进化,在非核心真双子叶植物中进行了扩展采样。

Evolution of RADIALIS and DIVARICATA gene lineages in flowering plants with an expanded sampling in non-core eudicots.

机构信息

Instituto de Biología, Universidad de Antioquia, AA 1226, Cl. 67 No. 53-108, Medellín, Colombia.

Centro Nacional de Secuenciación Genómica, SIU, Facultad de Medicina, Universidad de Antioquia, Cl. 70 No. 52-21, Medellín, Colombia.

出版信息

Am J Bot. 2019 Mar;106(3):334-351. doi: 10.1002/ajb2.1243. Epub 2019 Mar 7.

Abstract

PREMISE OF THE STUDY

Bilateral symmetry in core eudicot flowers is established by the differential expression of CYCLOIDEA (CYC), DICHOTOMA (DICH), and RADIALIS (RAD), which are restricted to the dorsal portion of the flower, and DIVARICATA (DIV), restricted to the ventral and lateral petals. Little is known regarding the evolution of these gene lineages in non-core eudicots, and there are no reports on gene expression that can be used to assess whether the network predates the diversification of core eudicots.

METHODS

Homologs of the RAD and DIV lineages were isolated from available genomes and transcriptomes, including those of three selected non-core eudicot species, the magnoliid Aristolochia fimbriata and the monocots Cattleya trianae and Hypoxis decumbens. Phylogenetic analyses for each gene lineage were performed. RT-PCR was used to evaluate the expression and putative contribution to floral symmetry in dissected floral organs of the selected species.

KEY RESULTS

RAD-like genes have undergone at least two duplication events before eudicot diversification, three before monocots and at least four in Orchidaceae. DIV-like genes also duplicated twice before eudicot diversification and underwent independent duplications specific to Orchidaceae. RAD-like and DIV-like genes have differential dorsiventral expression only in C. trianae, which contrasts with the homogeneous expression in the perianth of A. fimbriata.

CONCLUSIONS

Our results point to a common genetic regulatory network for floral symmetry in monocots and core eudicots, while alternative genetic mechanisms are likely driving the bilateral perianth symmetry in the early-diverging angiosperm Aristolochia.

摘要

研究前提

双边对称性在核心真双子叶植物的花朵中是通过 CYCLOIDEA(CYC)、DICHOTOMA(DICH)和 RADIALIS(RAD)的差异表达建立的,这些基因仅限于花的背部,而 DIVARICATA(DIV)仅限于腹侧和侧花瓣。关于这些基因谱系在非核心真双子叶植物中的进化知之甚少,也没有关于可以用来评估网络是否先于核心真双子叶植物多样化的基因表达的报告。

方法

RAD 和 DIV 谱系的同源物从可用的基因组和转录组中分离出来,包括三个选定的非核心真双子叶植物物种,Magnoliid Aristolochia fimbriata 和单子叶植物 Cattleya trianae 和 Hypoxis decumbens。对每个基因谱系进行了系统发育分析。使用 RT-PCR 评估了选定物种解剖花器官中基因的表达及其对花对称性的可能贡献。

主要结果

RAD 样基因在真双子叶植物多样化之前至少经历了两次复制事件,在单子叶植物之前经历了三次复制事件,在 Orchidaceae 中至少经历了四次复制事件。DIV 样基因在真双子叶植物多样化之前也经历了两次复制事件,并在 Orchidaceae 中经历了独立的复制事件。RAD 样和 DIV 样基因仅在 Cattleya trianae 中表现出背腹差异表达,这与 Aristolochia fimbriata 花被的均匀表达形成对比。

结论

我们的结果表明,单子叶植物和核心真双子叶植物的花对称性具有共同的遗传调控网络,而在早期分化的被子植物 Aristolochia 中,可能存在替代的遗传机制来驱动双边花被对称性。

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