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川续断目中DIVARICATA样基因的重复与表达

Duplications and expression of DIVARICATA-like genes in dipsacales.

作者信息

Howarth Dianella G, Donoghue Michael J

机构信息

Department of Biological Sciences, St. John's University, Queens, NY, USA.

出版信息

Mol Biol Evol. 2009 Jun;26(6):1245-58. doi: 10.1093/molbev/msp051. Epub 2009 Mar 16.

Abstract

The genetics underlying flower symmetry shifts between radial and bilateral symmetry has been intensively studied in the model Antirrhinum majus. Understanding the conservation or diversification of this genetic pathway in other plants is of special interest in understanding angiosperm evolution and ecology. Evidence from Antirrhinum indicates that TCP and MYB transcription factors, especially CYCLOIDEA (CYC), DICHOTOMA (DICH), DIVARICATA (DIV), and RADIALIS (RAD) play a role in specifying dorsal identity (CYC, DICH, and RAD) and ventral identity (DIV) in the corolla and androecium of monosymmetric (bilateral) flowers. Previous data indicate that the ECE clade of TCP genes (including CYC and DICH) underwent two duplication events around the diversification of the core eudicots. In this study, we examined the duplication events within Dipsacales, which contains both radially and bilaterally symmetrical flowered species. Additionally, we report here the phylogenetic relationships of the DIV-like genes across core eudicots. Like TCP genes, we found three core eudicot clades of DIV-like genes, with duplications occurring around the diversification of the core eudicots, which we name DIV1, DIV2, and DIV3. The Antirrhinum genes, DIVARICATA and its sister DVL1, fall into the DIV1 clade. We also found additional duplications within these clades in Dipsacales. Specifically, the Caprifoliaceae (bilaterally symmetrical clade) duplicated independently in each of the three core eudicot DIV clades. Using reverse transcription polymerase chain reaction (rtPCR), we showed that most of these copies are expressed across floral tissues in the Dipsacales species Heptacodium miconioides. One copy, DipsDIV1A (orthologous to DIV and DVL1), was expressed in a dorsal-ventral pattern. DipsDIV1A was expressed only in petal tissue, in both dorsal and ventral regions but was lacking from lateral petals. We argue that this suggests that DipsDIV1A may be expressed in a similar pattern to DIV in Antirrhinum, suggesting a broad conservation of this pathway. Finally, DIV contains a large intron near the beginning of the second MYB domain, which shows promise as a highly variable molecular marker for phylogenetic studies.

摘要

花对称性从辐射对称向两侧对称转变的遗传学机制已在模式植物金鱼草中得到深入研究。了解该遗传途径在其他植物中的保守性或多样性对于理解被子植物的进化和生态具有特殊意义。来自金鱼草的证据表明,TCP和MYB转录因子,特别是CYCLOIDEA(CYC)、DICHOTOMA(DICH)、DIVARICATA(DIV)和RADIALIS(RAD)在确定单对称(两侧对称)花花冠和雄蕊群的背侧身份(CYC、DICH和RAD)以及腹侧身份(DIV)中发挥作用。先前的数据表明,TCP基因的ECE分支(包括CYC和DICH)在核心真双子叶植物多样化期间经历了两次复制事件。在本研究中,我们研究了川续断目中的复制事件,该目中既有辐射对称花的物种,也有两侧对称花的物种。此外,我们在此报告了核心真双子叶植物中DIV样基因的系统发育关系。与TCP基因一样,我们发现了DIV样基因的三个核心真双子叶植物分支,其复制发生在核心真双子叶植物多样化期间,我们将其命名为DIV1、DIV2和DIV3。金鱼草基因DIVARICATA及其姊妹基因DVL1属于DIV1分支。我们还在川续断目的这些分支中发现了额外的复制。具体而言,忍冬科(两侧对称分支)在三个核心真双子叶植物DIV分支中各自独立复制。使用逆转录聚合酶链反应(rtPCR),我们表明这些拷贝中的大多数在川续断目物种七子花的花组织中均有表达。其中一个拷贝DipsDIV1A(与DIV和DVL1直系同源)以背腹模式表达。DipsDIV1A仅在花瓣组织中表达,在背侧和腹侧区域均有表达,但侧花瓣中没有。我们认为,这表明DipsDIV1A可能以与金鱼草中DIV相似的模式表达,这表明该途径具有广泛的保守性。最后,DIV在第二个MYB结构域开始处附近有一个大内含子,这有望成为系统发育研究中一个高度可变的分子标记。

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